RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
DDX54-210ENST00000552375 COA1Q9GZY4 146 aa17.69■□□□□ 0.42
DDX54-210ENST00000552375 TLL2Q9Y6L7 1015 aa17.69■□□□□ 0.42
DDX54-210ENST00000552375 KCNJ4P48050 445 aa17.68■□□□□ 0.42
DDX54-210ENST00000552375 GMLQ99445 158 aa17.68■□□□□ 0.42
DDX54-210ENST00000552375 GGA3Q9NZ52 723 aa17.68■□□□□ 0.42
DDX54-210ENST00000552375 THSD7BQ9C0I4 1608 aa17.68■□□□□ 0.42
DDX54-210ENST00000552375 UTYO14607 1347 aa17.68■□□□□ 0.42
DDX54-210ENST00000552375 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
DDX54-210ENST00000552375 RARSP54136 660 aaKnown RBP17.67■□□□□ 0.42
DDX54-210ENST00000552375 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
DDX54-210ENST00000552375 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
DDX54-210ENST00000552375 KRT26Q7Z3Y9 468 aa17.67■□□□□ 0.42
DDX54-210ENST00000552375 TXNRD3Q86VQ6 643 aa17.67■□□□□ 0.42
DDX54-210ENST00000552375 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
DDX54-210ENST00000552375 PSME4Q14997 1843 aa17.67■□□□□ 0.42
DDX54-210ENST00000552375 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
DDX54-210ENST00000552375 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 ECE1P42892 770 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 DACT2Q5SW24 774 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 COL13A1Q5TAT6 717 aaPredicted RBP17.66■□□□□ 0.42
DDX54-210ENST00000552375 STRIP1Q5VSL9 837 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 PAXIP1Q6ZW49 1069 aaPredicted RBP17.66■□□□□ 0.42
DDX54-210ENST00000552375 SAPCD2Q86UD0 394 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 USP48Q86UV5 1035 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 CAPNS2Q96L46 248 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 ZNF408Q9H9D4 720 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 NOB1Q9ULX3 412 aaKnown RBP17.66■□□□□ 0.42
DDX54-210ENST00000552375 MYO3BQ8WXR4 1341 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 IRS2Q9Y4H2 1338 aa17.66■□□□□ 0.42
DDX54-210ENST00000552375 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
DDX54-210ENST00000552375 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
DDX54-210ENST00000552375 DCPSQ96C86 337 aaKnown RBP17.65■□□□□ 0.42
DDX54-210ENST00000552375 TRPM7Q96QT4 1865 aa17.65■□□□□ 0.42
DDX54-210ENST00000552375 ADM5C9JUS6 153 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 BCAR3O75815 825 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 CYP4F22Q6NT55 531 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 C15orf52Q6ZUT6 534 aaKnown RBP17.64■□□□□ 0.41
DDX54-210ENST00000552375 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 FBXW7Q969H0 707 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 HHIPL1Q96JK4 782 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 MYOZ2Q9NPC6 264 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 WBP1LQ9NX94 342 aa17.64■□□□□ 0.41
DDX54-210ENST00000552375 ASTN2O75129 1339 aaPredicted RBP17.64■□□□□ 0.41
DDX54-210ENST00000552375 SNAP23O00161 211 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 FOXN1O15353 648 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 TAF5LO75529 589 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
DDX54-210ENST00000552375 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
DDX54-210ENST00000552375 MXD3Q9BW11 206 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
DDX54-210ENST00000552375 MAP2K1Q02750 393 aaPredicted RBP17.62■□□□□ 0.41
DDX54-210ENST00000552375 GRM1Q13255 1194 aa17.62■□□□□ 0.41
DDX54-210ENST00000552375 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
DDX54-210ENST00000552375 DLK2Q6UY11 383 aa17.62■□□□□ 0.41
DDX54-210ENST00000552375 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
DDX54-210ENST00000552375 FRAT1Q92837 279 aaPredicted RBP17.62■□□□□ 0.41
DDX54-210ENST00000552375 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
DDX54-210ENST00000552375 CD209Q9NNX6 404 aa17.62■□□□□ 0.41
DDX54-210ENST00000552375 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
DDX54-210ENST00000552375 PITPNM2Q9BZ72 1349 aa17.62■□□□□ 0.41
DDX54-210ENST00000552375 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
DDX54-210ENST00000552375 SCARF1Q14162 830 aa17.61■□□□□ 0.41
DDX54-210ENST00000552375 OGFOD1Q8N543 542 aa17.61■□□□□ 0.41
DDX54-210ENST00000552375 ANKRD44Q8N8A2 993 aa17.61■□□□□ 0.41
DDX54-210ENST00000552375 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
DDX54-210ENST00000552375 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
DDX54-210ENST00000552375 MMP14P50281 582 aa17.6■□□□□ 0.41
DDX54-210ENST00000552375 TTLL5Q6EMB2 1281 aa17.6■□□□□ 0.41
DDX54-210ENST00000552375 ZNF804AQ7Z570 1209 aa17.6■□□□□ 0.41
DDX54-210ENST00000552375 GBA2Q9HCG7 927 aaPredicted RBP17.6■□□□□ 0.41
DDX54-210ENST00000552375 HUNKP57058 714 aa17.59■□□□□ 0.41
DDX54-210ENST00000552375 GTF2IP78347 998 aa17.59■□□□□ 0.41
DDX54-210ENST00000552375 CDCA5Q96FF9 252 aa17.59■□□□□ 0.41
DDX54-210ENST00000552375 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
DDX54-210ENST00000552375 IL1R1P14778 569 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 MAP2K2P36507 400 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
DDX54-210ENST00000552375 KIAA0825Q8IV33 1275 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 USP44Q9H0E7 712 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
DDX54-210ENST00000552375 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 WNT10BO00744 389 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 PLIN1O60240 522 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 AOC2O75106 756 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 UBE4AQ14139 1066 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 NBPF9Q3BBW0 867 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
DDX54-210ENST00000552375 HDAC9Q9UKV0 1011 aa17.57■□□□□ 0.4
DDX54-210ENST00000552375 SASH1O94885 1247 aa17.56■□□□□ 0.4
DDX54-210ENST00000552375 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
DDX54-210ENST00000552375 TRIM27P14373 513 aa17.56■□□□□ 0.4
DDX54-210ENST00000552375 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms