RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CENPBP07199 599 aaPredicted RBP8.54□□□□□ -1.04
VPS29-210ENST00000552130 INPP5BP32019 993 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 ANAPC15P60006 121 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 PERM1Q5SV97 790 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
VPS29-210ENST00000552130 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
VPS29-210ENST00000552130 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
VPS29-210ENST00000552130 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
VPS29-210ENST00000552130 RAD51AP2Q09MP3 1159 aa8.53□□□□□ -1.04
VPS29-210ENST00000552130 DZIP1LQ8IYY4 767 aaKnown RBP8.53□□□□□ -1.04
VPS29-210ENST00000552130 NGLY1Q96IV0 654 aa8.53□□□□□ -1.04
VPS29-210ENST00000552130 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
VPS29-210ENST00000552130 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
VPS29-210ENST00000552130 CPB1P15086 417 aa8.52□□□□□ -1.05
VPS29-210ENST00000552130 GTF2F1P35269 517 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS29-210ENST00000552130 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.05
VPS29-210ENST00000552130 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
VPS29-210ENST00000552130 SLC51AQ86UW1 340 aa8.52□□□□□ -1.05
VPS29-210ENST00000552130 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
VPS29-210ENST00000552130 DLL1O00548 723 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 SEC13P55735 322 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 GPLD1P80108 840 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 SMC5Q8IY18 1101 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 SLC43A3Q8NBI5 491 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 CLP1Q92989 425 aaKnown RBP8.51□□□□□ -1.05
VPS29-210ENST00000552130 ARMC5Q96C12 935 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 BRINP2Q9C0B6 783 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 PIF1Q9H611 641 aa8.51□□□□□ -1.05
VPS29-210ENST00000552130 NOP58Q9Y2X3 529 aaKnown RBP8.51□□□□□ -1.05
VPS29-210ENST00000552130 CCDC194A0A1B0GVG4 234 aa8.5□□□□□ -1.05
VPS29-210ENST00000552130 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
VPS29-210ENST00000552130 APBB1IPQ7Z5R6 666 aaPredicted RBP8.5□□□□□ -1.05
VPS29-210ENST00000552130 WFDC8Q8IUA0 241 aa8.5□□□□□ -1.05
VPS29-210ENST00000552130 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
VPS29-210ENST00000552130 HMGB1P1B2RPK0 211 aaPredicted RBP8.49□□□□□ -1.05
VPS29-210ENST00000552130 EPB42P16452 691 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 IGFBP4P22692 258 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 IDH3AP50213 366 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 COL19A1Q14993 1142 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 RALBP1Q15311 655 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
VPS29-210ENST00000552130 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
VPS29-210ENST00000552130 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
VPS29-210ENST00000552130 RASA1P20936 1047 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 TARSP26639 723 aaKnown RBP8.48□□□□□ -1.05
VPS29-210ENST00000552130 MAPK1P28482 360 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 ELMSAN1Q6PJG2 1045 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 NT5DC4Q86YG4 428 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 TMEM130Q8N3G9 435 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 ZSWIM4Q9H7M6 989 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 CHPF2Q9P2E5 772 aa8.48□□□□□ -1.05
VPS29-210ENST00000552130 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
VPS29-210ENST00000552130 EIF3JO75822 258 aaKnown RBP8.47□□□□□ -1.05
VPS29-210ENST00000552130 EAPPQ56P03 285 aaPredicted RBP8.47□□□□□ -1.05
VPS29-210ENST00000552130 Q6ZS46 218 aa8.47□□□□□ -1.05
VPS29-210ENST00000552130 PMFBP1Q8TBY8 1022 aa8.47□□□□□ -1.05
VPS29-210ENST00000552130 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
VPS29-210ENST00000552130 FAM196BA6NMK8 535 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 EGFRP00533 1210 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 ARSDP51689 593 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 NRLP54845 237 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 ZSCAN29Q8IWY8 852 aaPredicted RBP8.46□□□□□ -1.06
VPS29-210ENST00000552130 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 CAPN10Q9HC96 672 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
VPS29-210ENST00000552130 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L21D6R901 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 FSTP19883 344 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 SCNN1AP37088 669 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 CD97P48960 835 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 FGD1P98174 961 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
VPS29-210ENST00000552130 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 PTK7Q13308 1070 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 RNF187Q5TA31 235 aaPredicted RBP8.45□□□□□ -1.06
VPS29-210ENST00000552130 KRT25Q7Z3Z0 450 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
VPS29-210ENST00000552130 CCDC136Q96JN2 1154 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 TGIF2Q9GZN2 237 aa8.45□□□□□ -1.06
VPS29-210ENST00000552130 SMG9Q9H0W8 520 aaKnown RBP8.45□□□□□ -1.06
VPS29-210ENST00000552130 AKTIPQ9H8T0 292 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms