RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ATP5J2-PTCD1G3V325 749 aa19.82■□□□□ 0.76
BRF1-220ENST00000552127 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
BRF1-220ENST00000552127 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
BRF1-220ENST00000552127 OTUD5Q96G74 571 aa19.82■□□□□ 0.76
BRF1-220ENST00000552127 RANBP2P49792 3224 aaKnown RBP19.81■□□□□ 0.76
BRF1-220ENST00000552127 FANCIQ9NVI1 1328 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 RIC3Q7Z5B4 369 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 ARMC5Q96C12 935 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 MYOZ2Q9NPC6 264 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 PTPN22Q9Y2R2 807 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
BRF1-220ENST00000552127 COL4A1P02462 1669 aa19.81■□□□□ 0.76
BRF1-220ENST00000552127 ZNF609O15014 1411 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 ALDH1A1P00352 501 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 TWISTNBQ3B726 338 aaPredicted RBP19.8■□□□□ 0.76
BRF1-220ENST00000552127 WDR63Q8IWG1 891 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 AGBL3Q8NEM8 1001 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 ZNF428Q96B54 188 aa19.8■□□□□ 0.76
BRF1-220ENST00000552127 PSME4Q14997 1843 aa19.79■□□□□ 0.76
BRF1-220ENST00000552127 H0YGN5 161 aa19.79■□□□□ 0.76
BRF1-220ENST00000552127 TRIM28Q13263 835 aaKnown RBP19.79■□□□□ 0.76
BRF1-220ENST00000552127 RSBN1LQ6PCB5 846 aaPredicted RBP19.79■□□□□ 0.76
BRF1-220ENST00000552127 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
BRF1-220ENST00000552127 ZC3H12CQ9C0D7 883 aaKnown RBP19.79■□□□□ 0.76
BRF1-220ENST00000552127 DDX58O95786 925 aaKnown RBP19.78■□□□□ 0.76
BRF1-220ENST00000552127 PTPN12Q05209 780 aaKnown RBP19.78■□□□□ 0.76
BRF1-220ENST00000552127 FAM89AQ96GI7 184 aa19.78■□□□□ 0.76
BRF1-220ENST00000552127 SPEF2Q9C093 1822 aa19.78■□□□□ 0.76
BRF1-220ENST00000552127 USP17L8P0C7I0 530 aa19.77■□□□□ 0.76
BRF1-220ENST00000552127 SPRYD7Q5W111 196 aa19.77■□□□□ 0.76
BRF1-220ENST00000552127 MYD88Q99836 296 aa19.77■□□□□ 0.76
BRF1-220ENST00000552127 CUL9Q8IWT3 2517 aa19.77■□□□□ 0.76
BRF1-220ENST00000552127 G3V3G9 751 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 NF2P35240 595 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 CHRDL2Q6WN34 429 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 IFNL1Q8IU54 200 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 CD99L2Q8TCZ2 262 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 GMLQ99445 158 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 TMEM106CQ9BVX2 250 aa19.76■□□□□ 0.75
BRF1-220ENST00000552127 PRKG1Q13976 671 aa19.75■□□□□ 0.75
BRF1-220ENST00000552127 NBPF9Q3BBW0 867 aa19.75■□□□□ 0.75
BRF1-220ENST00000552127 METTL22Q9BUU2 404 aaPredicted RBP19.75■□□□□ 0.75
BRF1-220ENST00000552127 IRS4O14654 1257 aaPredicted RBP19.74■□□□□ 0.75
BRF1-220ENST00000552127 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
BRF1-220ENST00000552127 ZBTB38Q8NAP3 1195 aaPredicted RBP19.74■□□□□ 0.75
BRF1-220ENST00000552127 CCDC191Q8NCU4 936 aa19.74■□□□□ 0.75
BRF1-220ENST00000552127 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
BRF1-220ENST00000552127 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
BRF1-220ENST00000552127 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
BRF1-220ENST00000552127 ARMC9Q7Z3E5 817 aa19.73■□□□□ 0.75
BRF1-220ENST00000552127 ZNF333Q96JL9 665 aa19.73■□□□□ 0.75
BRF1-220ENST00000552127 EFCC1Q9HA90 598 aa19.73■□□□□ 0.75
BRF1-220ENST00000552127 CWC25Q9NXE8 425 aaPredicted RBP19.73■□□□□ 0.75
BRF1-220ENST00000552127 RBM27Q9P2N5 1060 aaKnown RBP19.73■□□□□ 0.75
BRF1-220ENST00000552127 PI4KAP2A4QPH2 592 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 MANSC4A6NHS7 340 aaPredicted RBP19.72■□□□□ 0.75
BRF1-220ENST00000552127 IGF2BP3O00425 579 aaKnown RBP eCLIP19.72■□□□□ 0.75
BRF1-220ENST00000552127 UFL1O94874 794 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 INHBEP58166 350 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
BRF1-220ENST00000552127 LDLRAD1Q5T700 205 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 G2E3Q7L622 706 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 PI4KAP1Q8N8J0 262 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
BRF1-220ENST00000552127 PODXL2Q9NZ53 605 aa19.72■□□□□ 0.75
BRF1-220ENST00000552127 LAMB1P07942 1786 aa19.71■□□□□ 0.75
BRF1-220ENST00000552127 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
BRF1-220ENST00000552127 PCCAP05165 728 aaPredicted RBP19.71■□□□□ 0.75
BRF1-220ENST00000552127 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
BRF1-220ENST00000552127 CAP1Q01518 475 aa19.71■□□□□ 0.75
BRF1-220ENST00000552127 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
BRF1-220ENST00000552127 VAMP4O75379 141 aa19.7■□□□□ 0.74
BRF1-220ENST00000552127 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
BRF1-220ENST00000552127 ANGEL1Q9UNK9 670 aaKnown RBP19.7■□□□□ 0.74
BRF1-220ENST00000552127 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
BRF1-220ENST00000552127 WNT10BO00744 389 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 FLIIQ13045 1269 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.69■□□□□ 0.74
BRF1-220ENST00000552127 ANKIB1Q9P2G1 1089 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 GGA1Q9UJY5 639 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 FZD1Q9UP38 647 aa19.69■□□□□ 0.74
BRF1-220ENST00000552127 USP17L3A6NCW0 530 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 USP17L4A6NCW7 530 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 CRHR2Q13324 411 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 SLC4A8Q2Y0W8 1093 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 USP17L1Q7RTZ2 530 aa19.68■□□□□ 0.74
BRF1-220ENST00000552127 ZBTB48P10074 688 aaPredicted RBP19.67■□□□□ 0.74
BRF1-220ENST00000552127 SP3Q02447 781 aa19.67■□□□□ 0.74
BRF1-220ENST00000552127 SLC10A4Q96EP9 437 aa19.67■□□□□ 0.74
BRF1-220ENST00000552127 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
BRF1-220ENST00000552127 PDE8AO60658 829 aa19.66■□□□□ 0.74
BRF1-220ENST00000552127 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
BRF1-220ENST00000552127 CWF19L2Q2TBE0 894 aaKnown RBP19.66■□□□□ 0.74
BRF1-220ENST00000552127 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
BRF1-220ENST00000552127 NBPF11Q86T75 865 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms