RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FAM187AA6NFU0 413 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 SPATA31C2B4DYI2 1134 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 TNFRSF10BO14763 440 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 TXLNAP40222 546 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 CTSOP43234 321 aaPredicted RBP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 USP5P45974 858 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 PHKA2P46019 1235 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 FGD1P98174 961 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 PLCB3Q01970 1234 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 COL19A1Q14993 1142 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 EAPPQ56P03 285 aaPredicted RBP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 WDR44Q5JSH3 913 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 MRPL14Q6P1L8 145 aaKnown RBP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 BICDL1Q6ZP65 573 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 LYSMD3Q7Z3D4 306 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 PRICKLE2Q7Z3G6 844 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 GIPC2Q8TF65 315 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 LRRC59Q96AG4 307 aaKnown RBP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 MRRFQ96E11 262 aaKnown RBP3.62□□□□□ -1.83
CPSF6-207ENST00000551516 IFT43Q96FT9 208 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 DMRTB1Q96MA1 342 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 CCDC87Q9NVE4 849 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 ZDHHC3Q9NYG2 299 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 KLK14Q9P0G3 267 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 ANKIB1Q9P2G1 1089 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 FZD6O60353 706 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 RPLP1P05386 114 aaKnown RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 ZNF16P17020 682 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 MZF1P28698 734 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 ZAP70P43403 619 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 DNM1Q05193 864 aaKnown RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 EHHADHQ08426 723 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 POU4F2Q12837 409 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 CTC1Q2NKJ3 1217 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 PKDCCQ504Y2 493 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 TMC7Q7Z402 723 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 TREML1Q86YW5 311 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 ZNF295-AS1Q8N0V1 137 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 EDEM1Q92611 657 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 TIMMDC1Q9NPL8 285 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 POLIQ9UNA4 740 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 GPC6Q9Y625 555 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 IQGAP3Q86VI3 1631 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 COL22A1Q8NFW1 1626 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-207ENST00000551516 NUP155O75694 1391 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 KANK1Q14678 1352 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 ABCC11Q96J66 1382 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 PLEKHH1Q9ULM0 1364 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 PHLPP1O60346 1717 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 NAIPQ13075 1403 aa3.61□□□□□ -1.83
CPSF6-207ENST00000551516 NRXN1Q9ULB1 1477 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 GLI3P10071 1580 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 TTLL8A6PVC2 850 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 TGFBR3LH3BV60 316 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ZBTB39O15060 712 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 TREHO43280 583 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 MICAL2O94851 1124 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 AVPP01185 164 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 NEFLP07196 543 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ITGAEP38570 1179 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ARSJQ5FYB0 599 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-207ENST00000551516 NBPF10Q6P3W6 841 aaKnown RBP3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ATCAYQ86WG3 371 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ETFBKMTQ8IXQ9 262 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 RNF217Q8TC41 542 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 PIK3R5Q8WYR1 880 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 SUSD3Q96L08 255 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 GJA3Q9Y6H8 435 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 SPATA31A3Q5VYP0 1347 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 ADGRF5Q8IZF2 1346 aa3.6□□□□□ -1.83
CPSF6-207ENST00000551516 RRBP1Q9P2E9 1410 aaKnown RBP3.6□□□□□ -1.83
CPSF6-207ENST00000551516 A0A1B0GTH6 734 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 UNCXA6NJT0 531 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 FIGNL2A6NMB9 653 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 AXIN1O15169 862 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 GFRA3O60609 400 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 DGAT1O75907 488 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 PDGFAP04085 211 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 EPB42P16452 691 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 RHOQP17081 205 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 ATF3P18847 181 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 MAPK8P45983 427 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 ATP2B2Q01814 1243 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 XPCQ01831 940 aaPredicted RBP3.59□□□□□ -1.83
CPSF6-207ENST00000551516 C8orf34Q49A92 452 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 FAM26DQ5JW98 314 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 IER5Q5VY09 327 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 DEFB132Q7Z7B7 95 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 GPR152Q8TDT2 470 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 NUDT16Q96DE0 195 aaKnown RBP3.59□□□□□ -1.83
CPSF6-207ENST00000551516 FAM129BQ96TA1 746 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 NIF3L1Q9GZT8 377 aa3.59□□□□□ -1.83
CPSF6-207ENST00000551516 FNDC3AQ9Y2H6 1198 aaKnown RBP3.59□□□□□ -1.83
CPSF6-207ENST00000551516 CFAP65Q6ZU64 1925 aaKnown RBP3.59□□□□□ -1.83
CPSF6-207ENST00000551516 DISP2A7MBM2 1401 aa3.59□□□□□ -1.84
CPSF6-207ENST00000551516 RALGAPBQ86X10 1494 aa3.59□□□□□ -1.84
CPSF6-207ENST00000551516 MYO5BQ9ULV0 1848 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 FAM83GA6ND36 823 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 LDHBP07195 334 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms