RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
SNRPF-203ENST00000551316 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
SNRPF-203ENST00000551316 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
SNRPF-203ENST00000551316 CDH23Q9H251 3354 aa18.01■□□□□ 0.47
SNRPF-203ENST00000551316 A0A1W2PPC1 479 aa18.01■□□□□ 0.47
SNRPF-203ENST00000551316 PDIA6Q15084 440 aa18.01■□□□□ 0.47
SNRPF-203ENST00000551316 EYA3Q99504 573 aa18.01■□□□□ 0.47
SNRPF-203ENST00000551316 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
SNRPF-203ENST00000551316 UFL1O94874 794 aa18■□□□□ 0.47
SNRPF-203ENST00000551316 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
SNRPF-203ENST00000551316 NF2P35240 595 aa18■□□□□ 0.47
SNRPF-203ENST00000551316 NBPF11Q86T75 865 aa18■□□□□ 0.47
SNRPF-203ENST00000551316 SH3TC1Q8TE82 1336 aa17.99■□□□□ 0.47
SNRPF-203ENST00000551316 EIF4A1P60842 406 aaKnown RBP17.99■□□□□ 0.47
SNRPF-203ENST00000551316 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
SNRPF-203ENST00000551316 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
SNRPF-203ENST00000551316 INHBEP58166 350 aa17.98■□□□□ 0.47
SNRPF-203ENST00000551316 ZC3H12CQ9C0D7 883 aaKnown RBP17.98■□□□□ 0.47
SNRPF-203ENST00000551316 TAF7Q15545 349 aaPredicted RBP17.97■□□□□ 0.47
SNRPF-203ENST00000551316 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
SNRPF-203ENST00000551316 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
SNRPF-203ENST00000551316 CTGFP29279 349 aa17.96■□□□□ 0.47
SNRPF-203ENST00000551316 MAP3K11Q16584 847 aa17.96■□□□□ 0.47
SNRPF-203ENST00000551316 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
SNRPF-203ENST00000551316 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
SNRPF-203ENST00000551316 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
SNRPF-203ENST00000551316 TESPA1A2RU30 521 aaPredicted RBP17.95■□□□□ 0.46
SNRPF-203ENST00000551316 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
SNRPF-203ENST00000551316 AOX1Q06278 1338 aa17.95■□□□□ 0.46
SNRPF-203ENST00000551316 USP17L3A6NCW0 530 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 USP17L4A6NCW7 530 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
SNRPF-203ENST00000551316 COL9A1P20849 921 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
SNRPF-203ENST00000551316 DACT2Q5SW24 774 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 USP17L1Q7RTZ2 530 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 BRI3BPQ8WY22 251 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 SEC31BQ9NQW1 1179 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 PCDHAC2Q9Y5I4 1007 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 MGAMO43451 1857 aa17.94■□□□□ 0.46
SNRPF-203ENST00000551316 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
SNRPF-203ENST00000551316 ZBED3Q96IU2 234 aaPredicted RBP17.93■□□□□ 0.46
SNRPF-203ENST00000551316 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
SNRPF-203ENST00000551316 HTATIP2Q9BUP3 242 aa17.93■□□□□ 0.46
SNRPF-203ENST00000551316 NR2E3Q9Y5X4 410 aa17.93■□□□□ 0.46
SNRPF-203ENST00000551316 GJA8P48165 433 aa17.92■□□□□ 0.46
SNRPF-203ENST00000551316 BCAMP50895 628 aa17.92■□□□□ 0.46
SNRPF-203ENST00000551316 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
SNRPF-203ENST00000551316 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
SNRPF-203ENST00000551316 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
SNRPF-203ENST00000551316 GDF15Q99988 308 aa17.92■□□□□ 0.46
SNRPF-203ENST00000551316 G3V3G9 751 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 FARP2O94887 1054 aaPredicted RBP17.91■□□□□ 0.46
SNRPF-203ENST00000551316 TAF1CQ15572 869 aaPredicted RBP17.91■□□□□ 0.46
SNRPF-203ENST00000551316 DCAF8Q5TAQ9 597 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 GPR153Q6NV75 609 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 APOBEC3FQ8IUX4 373 aaKnown RBP17.91■□□□□ 0.46
SNRPF-203ENST00000551316 GUCD1Q96NT3 240 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 ARAP2Q8WZ64 1704 aa17.91■□□□□ 0.46
SNRPF-203ENST00000551316 CCL5P13501 91 aa17.9■□□□□ 0.46
SNRPF-203ENST00000551316 AIMP1Q12904 312 aaKnown RBP17.9■□□□□ 0.46
SNRPF-203ENST00000551316 CNGB1Q14028 1251 aaPredicted RBP17.9■□□□□ 0.46
SNRPF-203ENST00000551316 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
SNRPF-203ENST00000551316 DEFB129Q9H1M3 183 aa17.9■□□□□ 0.46
SNRPF-203ENST00000551316 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
SNRPF-203ENST00000551316 LACTBP83111 547 aaPredicted RBP17.89■□□□□ 0.45
SNRPF-203ENST00000551316 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
SNRPF-203ENST00000551316 ELP3Q9H9T3 547 aa17.89■□□□□ 0.45
SNRPF-203ENST00000551316 ANKIB1Q9P2G1 1089 aa17.89■□□□□ 0.45
SNRPF-203ENST00000551316 OTUD7BQ6GQQ9 843 aa17.88■□□□□ 0.45
SNRPF-203ENST00000551316 OPTNQ96CV9 577 aa17.88■□□□□ 0.45
SNRPF-203ENST00000551316 RPTORQ8N122 1335 aa17.88■□□□□ 0.45
SNRPF-203ENST00000551316 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
SNRPF-203ENST00000551316 EVI5O60447 810 aa17.87■□□□□ 0.45
SNRPF-203ENST00000551316 GJB1P08034 283 aa17.87■□□□□ 0.45
SNRPF-203ENST00000551316 EIF2S2P20042 333 aaKnown RBP17.87■□□□□ 0.45
SNRPF-203ENST00000551316 NBPF12Q5TAG4 269 aaPredicted RBP17.87■□□□□ 0.45
SNRPF-203ENST00000551316 CDAN1Q8IWY9 1227 aa17.87■□□□□ 0.45
SNRPF-203ENST00000551316 FBXW7Q969H0 707 aa17.87■□□□□ 0.45
SNRPF-203ENST00000551316 A0A1B0GUL6 1792 aa17.86■□□□□ 0.45
SNRPF-203ENST00000551316 USP2O75604 605 aaPredicted RBP17.86■□□□□ 0.45
SNRPF-203ENST00000551316 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
SNRPF-203ENST00000551316 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
SNRPF-203ENST00000551316 ZMYND8Q9ULU4 1186 aaPredicted RBP17.86■□□□□ 0.45
SNRPF-203ENST00000551316 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
SNRPF-203ENST00000551316 CCL15-CCL14A0A0B4J2E2 113 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 HTATSF1O43719 755 aaKnown RBP17.85■□□□□ 0.45
SNRPF-203ENST00000551316 CCL15Q16663 113 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 LRIT3Q3SXY7 679 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 PODNQ7Z5L7 613 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 ZFYVE28Q9HCC9 887 aa17.85■□□□□ 0.45
SNRPF-203ENST00000551316 COL2A1P02458 1487 aaPredicted RBP17.84■□□□□ 0.45
SNRPF-203ENST00000551316 MED23Q9ULK4 1368 aa17.84■□□□□ 0.45
SNRPF-203ENST00000551316 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
SNRPF-203ENST00000551316 BMP8BP34820 402 aa17.84■□□□□ 0.45
SNRPF-203ENST00000551316 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms