RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 EXOC6BQ9Y2D4 811 aa26.48■■□□□ 1.83
NEK3-202ENST00000550841 CCDC88AQ3V6T2 1871 aa26.48■■□□□ 1.83
NEK3-202ENST00000550841 PRELPP51888 382 aa26.47■■□□□ 1.83
NEK3-202ENST00000550841 DCTPP1Q9H773 170 aa26.47■■□□□ 1.83
NEK3-202ENST00000550841 GPR108Q9NPR9 543 aa26.47■■□□□ 1.83
NEK3-202ENST00000550841 DUOX1Q9NRD9 1551 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 ZC3H4Q9UPT8 1303 aaKnown RBP26.46■■□□□ 1.83
NEK3-202ENST00000550841 SASH1O94885 1247 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 FGFR2P21802 821 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 ATP2B3Q16720 1220 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 KIF1BPQ96EK5 621 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 NMRK2Q9NPI5 230 aa26.46■■□□□ 1.83
NEK3-202ENST00000550841 WTIPA6NIX2 430 aaPredicted RBP26.45■■□□□ 1.82
NEK3-202ENST00000550841 SNAP23O00161 211 aa26.45■■□□□ 1.82
NEK3-202ENST00000550841 CAVIN4Q5BKX8 364 aa26.45■■□□□ 1.82
NEK3-202ENST00000550841 C16orf71Q8IYS4 520 aaPredicted RBP26.45■■□□□ 1.82
NEK3-202ENST00000550841 GPR101Q96P66 508 aaPredicted RBP26.45■■□□□ 1.82
NEK3-202ENST00000550841 COA1Q9GZY4 146 aa26.45■■□□□ 1.82
NEK3-202ENST00000550841 ZNF804AQ7Z570 1209 aa26.44■■□□□ 1.82
NEK3-202ENST00000550841 ZNRF3Q9ULT6 936 aa26.44■■□□□ 1.82
NEK3-202ENST00000550841 DICER1Q9UPY3 1922 aaKnown RBP26.43■■□□□ 1.82
NEK3-202ENST00000550841 APLP1P51693 650 aa26.43■■□□□ 1.82
NEK3-202ENST00000550841 PODNQ7Z5L7 613 aa26.43■■□□□ 1.82
NEK3-202ENST00000550841 RHPN1Q8TCX5 695 aa26.43■■□□□ 1.82
NEK3-202ENST00000550841 A0A1B0GUL6 1792 aa26.43■■□□□ 1.82
NEK3-202ENST00000550841 KDM2BQ8NHM5 1336 aa26.42■■□□□ 1.82
NEK3-202ENST00000550841 EIF6P56537 245 aaKnown RBP26.42■■□□□ 1.82
NEK3-202ENST00000550841 DOK7Q18PE1 504 aa26.42■■□□□ 1.82
NEK3-202ENST00000550841 TXNRD3Q86VQ6 643 aa26.42■■□□□ 1.82
NEK3-202ENST00000550841 VPS37DQ86XT2 251 aa26.42■■□□□ 1.82
NEK3-202ENST00000550841 GCC1Q96CN9 775 aa26.42■■□□□ 1.82
NEK3-202ENST00000550841 FZD9O00144 591 aa26.41■■□□□ 1.82
NEK3-202ENST00000550841 HIBADHP31937 336 aaKnown RBP26.41■■□□□ 1.82
NEK3-202ENST00000550841 TIMM10P62072 90 aa26.41■■□□□ 1.82
NEK3-202ENST00000550841 NEUROD6Q96NK8 337 aa26.41■■□□□ 1.82
NEK3-202ENST00000550841 DBNDD1Q9H9R9 158 aa26.41■■□□□ 1.82
NEK3-202ENST00000550841 IRS2Q9Y4H2 1338 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 A0A1B0GUL7 405 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 APBB1O00213 710 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 ECE2O60344 883 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 DPY19L2Q6NUT2 758 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 CLASRPQ8N2M8 674 aaKnown RBP26.4■■□□□ 1.82
NEK3-202ENST00000550841 FAM84BQ96KN1 310 aaPredicted RBP26.4■■□□□ 1.82
NEK3-202ENST00000550841 LRRCC1Q9C099 1032 aa26.4■■□□□ 1.82
NEK3-202ENST00000550841 KLRK1P26718 216 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 TNNI3KQ59H18 835 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 ERICH6BQ5W0A0 696 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 FBXO33Q7Z6M2 555 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 CD209Q9NNX6 404 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 ZBTB47Q9UFB7 747 aaPredicted RBP26.39■■□□□ 1.82
NEK3-202ENST00000550841 FPGT-TNNI3KV9GXZ4 949 aa26.39■■□□□ 1.82
NEK3-202ENST00000550841 GYG1P46976 350 aa26.38■■□□□ 1.81
NEK3-202ENST00000550841 GORABQ5T7V8 394 aa26.38■■□□□ 1.81
NEK3-202ENST00000550841 RBM46Q8TBY0 533 aaKnown RBP26.38■■□□□ 1.81
NEK3-202ENST00000550841 GNL3LQ9NVN8 582 aaKnown RBP26.38■■□□□ 1.81
NEK3-202ENST00000550841 TNIP1Q15025 636 aa26.37■■□□□ 1.81
NEK3-202ENST00000550841 XAGE2Q96GT9 111 aa26.37■■□□□ 1.81
NEK3-202ENST00000550841 IL1R1P14778 569 aa26.36■■□□□ 1.81
NEK3-202ENST00000550841 RRAGCQ9HB90 399 aa26.36■■□□□ 1.81
NEK3-202ENST00000550841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.36■■□□□ 1.81
NEK3-202ENST00000550841 CEP350Q5VT06 3117 aa26.35■■□□□ 1.81
NEK3-202ENST00000550841 BCAMP50895 628 aa26.35■■□□□ 1.81
NEK3-202ENST00000550841 IFFO2Q5TF58 517 aa26.35■■□□□ 1.81
NEK3-202ENST00000550841 CIAPIN1Q6FI81 312 aa26.35■■□□□ 1.81
NEK3-202ENST00000550841 IL1RAPL2Q9NP60 686 aa26.35■■□□□ 1.81
NEK3-202ENST00000550841 ZNF609O15014 1411 aa26.34■■□□□ 1.81
NEK3-202ENST00000550841 YDJCA8MPS7 323 aa26.34■■□□□ 1.81
NEK3-202ENST00000550841 FRAT2O75474 233 aaPredicted RBP26.34■■□□□ 1.81
NEK3-202ENST00000550841 IGHDP01880 384 aa26.34■■□□□ 1.81
NEK3-202ENST00000550841 CXCL9Q07325 125 aa26.34■■□□□ 1.81
NEK3-202ENST00000550841 AACSQ86V21 672 aa26.34■■□□□ 1.81
NEK3-202ENST00000550841 TDRD7Q8NHU6 1098 aaKnown RBP26.34■■□□□ 1.81
NEK3-202ENST00000550841 EAF2Q96CJ1 260 aaPredicted RBP26.34■■□□□ 1.81
NEK3-202ENST00000550841 USP17L3A6NCW0 530 aa26.33■■□□□ 1.81
NEK3-202ENST00000550841 USP17L4A6NCW7 530 aa26.33■■□□□ 1.81
NEK3-202ENST00000550841 GLTPD2A6NH11 291 aa26.33■■□□□ 1.81
NEK3-202ENST00000550841 IFIT2P09913 472 aaKnown RBP26.33■■□□□ 1.81
NEK3-202ENST00000550841 CCDC158Q5M9N0 1113 aa26.33■■□□□ 1.81
NEK3-202ENST00000550841 USP17L1Q7RTZ2 530 aa26.33■■□□□ 1.81
NEK3-202ENST00000550841 COL4A5P29400 1685 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 ZBTB22O15209 634 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 RAD17O75943 681 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 ADORA1P30542 326 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 FSTL1Q12841 308 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 CCDC102BQ68D86 513 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 TTLL5Q6EMB2 1281 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 SMC5Q8IY18 1101 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 GPC2Q8N158 579 aa26.32■■□□□ 1.8
NEK3-202ENST00000550841 SEMA3EO15041 775 aa26.31■■□□□ 1.8
NEK3-202ENST00000550841 ANKRD45Q5TZF3 282 aa26.31■■□□□ 1.8
NEK3-202ENST00000550841 STRIP1Q5VSL9 837 aa26.31■■□□□ 1.8
NEK3-202ENST00000550841 CCDC8Q9H0W5 538 aaPredicted RBP26.31■■□□□ 1.8
NEK3-202ENST00000550841 UQCRFS1P1P0C7P4 283 aa26.3■■□□□ 1.8
NEK3-202ENST00000550841 DBNDD2Q9BQY9 259 aa26.3■■□□□ 1.8
NEK3-202ENST00000550841 GJA3Q9Y6H8 435 aa26.3■■□□□ 1.8
NEK3-202ENST00000550841 TIAM2Q8IVF5 1701 aa26.3■■□□□ 1.8
NEK3-202ENST00000550841 SMARCA5O60264 1052 aaPredicted RBP26.29■■□□□ 1.8
NEK3-202ENST00000550841 VIL1P09327 827 aaKnown RBP26.29■■□□□ 1.8
NEK3-202ENST00000550841 GTF2IP78347 998 aa26.29■■□□□ 1.8
NEK3-202ENST00000550841 KCNQ5Q9NR82 932 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms