RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TTC6Q86TZ1 520 aa21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 KRT85P78386 507 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 FGD1P98174 961 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 ATP2B3Q16720 1220 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 TTLL5Q6EMB2 1281 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 MYO5AQ9Y4I1 1855 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 FOXP2O15409 715 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 AGXT2Q9BYV1 514 aa21.94■■□□□ 1.1
PRPF40B-208ENST00000548436 UBN2Q6ZU65 1347 aa21.93■■□□□ 1.1
PRPF40B-208ENST00000548436 ANKRD18BA2A2Z9 1011 aa21.93■■□□□ 1.1
PRPF40B-208ENST00000548436 PFKFB2O60825 505 aa21.93■■□□□ 1.1
PRPF40B-208ENST00000548436 LETM1O95202 739 aaPredicted RBP21.93■■□□□ 1.1
PRPF40B-208ENST00000548436 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
PRPF40B-208ENST00000548436 ERVV-1B6SEH8 477 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 APOBRQ0VD83 1088 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 ZFYP08048 801 aaPredicted RBP21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 WASHC4Q2M389 1173 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 LRRFIP1Q32MZ4 808 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 ZSCAN30Q86W11 494 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 VGLL2Q8N8G2 317 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 SMARCC2Q8TAQ2 1214 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 DDX11Q96FC9 970 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 SLIT2O94813 1529 aa21.92■■□□□ 1.1
PRPF40B-208ENST00000548436 ABCC12Q96J65 1359 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 MCAMP43121 646 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 ELP1O95163 1332 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 PDE8AO60658 829 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 HS1BP3Q53T59 392 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 CHST3Q7LGC8 479 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 PUS7LQ9H0K6 701 aaKnown RBP21.91■■□□□ 1.1
PRPF40B-208ENST00000548436 PIP4K2BP78356 416 aa21.9■■□□□ 1.1
PRPF40B-208ENST00000548436 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
PRPF40B-208ENST00000548436 TFIP11Q9UBB9 837 aaKnown RBP21.9■■□□□ 1.1
PRPF40B-208ENST00000548436 MYH15Q9Y2K3 1946 aa21.9■■□□□ 1.1
PRPF40B-208ENST00000548436 NRAPQ86VF7 1730 aa21.9■■□□□ 1.1
PRPF40B-208ENST00000548436 CTDNEP1O95476 244 aa21.89■■□□□ 1.1
PRPF40B-208ENST00000548436 GIMAP6Q6P9H5 292 aa21.89■■□□□ 1.1
PRPF40B-208ENST00000548436 NSUN7Q8NE18 718 aaKnown RBP21.89■■□□□ 1.1
PRPF40B-208ENST00000548436 APPBP2Q92624 585 aa21.89■■□□□ 1.1
PRPF40B-208ENST00000548436 FUCA2Q9BTY2 467 aa21.89■■□□□ 1.09
PRPF40B-208ENST00000548436 FGAP02671 866 aa21.88■■□□□ 1.09
PRPF40B-208ENST00000548436 RESTQ13127 1097 aa21.88■■□□□ 1.09
PRPF40B-208ENST00000548436 FAM184AQ8NB25 1140 aa21.88■■□□□ 1.09
PRPF40B-208ENST00000548436 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.88■■□□□ 1.09
PRPF40B-208ENST00000548436 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 CCT2P78371 535 aaKnown RBP21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 SCAND2PQ9GZW5 306 aaPredicted RBP21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 SPATA31A1Q5TZJ5 1347 aa21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 PDE8BO95263 885 aa21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 EIF5P55010 431 aaKnown RBP21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 HAND2P61296 217 aa21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 INTS5Q6P9B9 1019 aaKnown RBP21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 CTNNA3Q9UI47 895 aa21.87■■□□□ 1.09
PRPF40B-208ENST00000548436 H3BQV1 296 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 LIG1P18858 919 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 LEO1Q8WVC0 666 aaPredicted RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 ZNF512BQ96KM6 892 aaPredicted RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 SPATA32Q96LK8 384 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 NCOA5Q9HCD5 579 aaKnown RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 MYH14Q7Z406 1995 aaKnown RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 LRP5O75197 1615 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 PDIA3P30101 505 aaKnown RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 DDB1Q16531 1140 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 UVSSAQ2YD98 709 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 ACSBG1Q96GR2 724 aa21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.86■■□□□ 1.09
PRPF40B-208ENST00000548436 A0A0G2JS52 829 aa21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 PTPDC1A2A3K4 754 aa21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 GPAA1O43292 621 aa21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 IMMTQ16891 758 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 ZNF274Q96GC6 653 aaPredicted RBP21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 CDCA7Q9BWT1 371 aaPredicted RBP21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 NOL7Q9UMY1 257 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 DDX60Q8IY21 1712 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 ARAP2Q8WZ64 1704 aa21.85■■□□□ 1.09
PRPF40B-208ENST00000548436 SUSD4Q5VX71 490 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 FBXL16Q8N461 479 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 SALL1Q9NSC2 1324 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 PHLPP1O60346 1717 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 ADD2P35612 726 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 PHKA1P46020 1223 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 NAP1L2Q9ULW6 460 aaPredicted RBP21.84■■□□□ 1.09
PRPF40B-208ENST00000548436 ATP6V1AP38606 617 aa21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 HMGN5P82970 282 aaKnown RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 CCDC102BQ68D86 513 aa21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 MARCH10Q8NA82 808 aaPredicted RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 HELBQ8NG08 1087 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms