RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 OSBP2Q969R2 916 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 ZSCAN31Q96LW9 406 aaPredicted RBP25.01■■□□□ 1.59
RITA1-201ENST00000548278 MYH7P12883 1935 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 M0R2C6 588 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 CYP21A2P08686 494 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 ERFEQ4G0M1 354 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 CCDC102BQ68D86 513 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 GNPATO15228 680 aa25■■□□□ 1.59
RITA1-201ENST00000548278 ARID4AP29374 1257 aaPredicted RBP25■■□□□ 1.59
RITA1-201ENST00000548278 TBC1D9BQ66K14 1250 aa25■■□□□ 1.59
RITA1-201ENST00000548278 SH2B1Q9NRF2 756 aaPredicted RBP25■■□□□ 1.59
RITA1-201ENST00000548278 HSPD1P10809 573 aaKnown RBP25■■□□□ 1.59
RITA1-201ENST00000548278 IGHMBP2P38935 993 aaKnown RBP25■■□□□ 1.59
RITA1-201ENST00000548278 PHKA1P46020 1223 aa25■■□□□ 1.59
RITA1-201ENST00000548278 GOLGA6L22H0YM25 854 aa24.99■■□□□ 1.59
RITA1-201ENST00000548278 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
RITA1-201ENST00000548278 SRP68Q9UHB9 627 aaKnown RBP24.99■■□□□ 1.59
RITA1-201ENST00000548278 COL4A1P02462 1669 aa24.99■■□□□ 1.59
RITA1-201ENST00000548278 UQCRFS1P1P0C7P4 283 aa24.98■■□□□ 1.59
RITA1-201ENST00000548278 SLC5A1P13866 664 aa24.98■■□□□ 1.59
RITA1-201ENST00000548278 SF3B3Q15393 1217 aaKnown RBP24.98■■□□□ 1.59
RITA1-201ENST00000548278 C3orf67Q6ZVT6 689 aa24.98■■□□□ 1.59
RITA1-201ENST00000548278 TPCN1Q9ULQ1 816 aa24.98■■□□□ 1.59
RITA1-201ENST00000548278 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.98■■□□□ 1.59
RITA1-201ENST00000548278 CASZ1Q86V15 1759 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 ME3Q16798 604 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 SLC10A5Q5PT55 438 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 BICDL1Q6ZP65 573 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 AMIGO3Q86WK7 504 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 NEK1Q96PY6 1258 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 RTCBQ9Y3I0 505 aaKnown RBP24.97■■□□□ 1.59
RITA1-201ENST00000548278 ANKRD1Q15327 319 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 SKOR2Q2VWA4 1001 aaPredicted RBP24.97■■□□□ 1.59
RITA1-201ENST00000548278 APPBP2Q92624 585 aa24.97■■□□□ 1.59
RITA1-201ENST00000548278 COL24A1Q17RW2 1714 aa24.96■■□□□ 1.59
RITA1-201ENST00000548278 SNAP23O00161 211 aa24.96■■□□□ 1.59
RITA1-201ENST00000548278 ST3GAL1Q11201 340 aa24.96■■□□□ 1.59
RITA1-201ENST00000548278 TTF1Q15361 905 aaPredicted RBP24.96■■□□□ 1.59
RITA1-201ENST00000548278 TCEANC2Q96MN5 208 aa24.96■■□□□ 1.59
RITA1-201ENST00000548278 CDC5LQ99459 802 aaKnown RBP24.96■■□□□ 1.59
RITA1-201ENST00000548278 ZPR1O75312 459 aa24.95■■□□□ 1.59
RITA1-201ENST00000548278 TOB2Q14106 344 aaPredicted RBP24.95■■□□□ 1.59
RITA1-201ENST00000548278 WASHC4Q2M389 1173 aa24.95■■□□□ 1.59
RITA1-201ENST00000548278 MCTP1Q6DN14 999 aa24.95■■□□□ 1.59
RITA1-201ENST00000548278 CCDC83Q8IWF9 413 aa24.95■■□□□ 1.59
RITA1-201ENST00000548278 STOX1Q6ZVD7 989 aa24.95■■□□□ 1.58
RITA1-201ENST00000548278 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.95■■□□□ 1.58
RITA1-201ENST00000548278 PIH1D3Q9NQM4 214 aaKnown RBP24.95■■□□□ 1.58
RITA1-201ENST00000548278 MYO5AQ9Y4I1 1855 aaKnown RBP24.94■■□□□ 1.58
RITA1-201ENST00000548278 C4BP0C0L5 1744 aa24.94■■□□□ 1.58
RITA1-201ENST00000548278 ARHGEF1Q92888 912 aaKnown RBP24.94■■□□□ 1.58
RITA1-201ENST00000548278 BCL11BQ9C0K0 894 aaPredicted RBP24.94■■□□□ 1.58
RITA1-201ENST00000548278 QTRT2Q9H974 415 aaKnown RBP24.94■■□□□ 1.58
RITA1-201ENST00000548278 FOXP2O15409 715 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 CHRNDQ07001 517 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 FOXD4L5Q5VV16 416 aaPredicted RBP24.93■■□□□ 1.58
RITA1-201ENST00000548278 FOXD4L4Q8WXT5 416 aaPredicted RBP24.93■■□□□ 1.58
RITA1-201ENST00000548278 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 NYXQ9GZU5 481 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 PUS7LQ9H0K6 701 aaKnown RBP24.93■■□□□ 1.58
RITA1-201ENST00000548278 GZF1Q9H116 711 aaPredicted RBP24.93■■□□□ 1.58
RITA1-201ENST00000548278 SMC3Q9UQE7 1217 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 ADD2P35612 726 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 ZSCAN25Q6NSZ9 544 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 LAMA4Q16363 1823 aa24.93■■□□□ 1.58
RITA1-201ENST00000548278 WDR33Q9C0J8 1336 aaKnown RBP24.92■■□□□ 1.58
RITA1-201ENST00000548278 TAF1P21675 1872 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 C4AP0C0L4 1744 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 A0A0G2JLW4 131 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 GTF2E1P29083 439 aaPredicted RBP24.91■■□□□ 1.58
RITA1-201ENST00000548278 ANKRD18AQ8IVF6 992 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 NECAB1Q8N987 351 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 SPATA5Q8NB90 893 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 LMBRD1Q9NUN5 540 aa24.91■■□□□ 1.58
RITA1-201ENST00000548278 SLC9C2Q5TAH2 1124 aa24.9■■□□□ 1.58
RITA1-201ENST00000548278 CHAMP1Q96JM3 812 aa24.9■■□□□ 1.58
RITA1-201ENST00000548278 A0A1B0GUL6 1792 aa24.9■■□□□ 1.58
RITA1-201ENST00000548278 HMGB1P09429 215 aaKnown RBP24.9■■□□□ 1.58
RITA1-201ENST00000548278 RASGRF1Q13972 1273 aa24.9■■□□□ 1.58
RITA1-201ENST00000548278 UBE3CQ15386 1083 aa24.9■■□□□ 1.58
RITA1-201ENST00000548278 NBPF5PQ86XG9 351 aaPredicted RBP24.9■■□□□ 1.58
RITA1-201ENST00000548278 GPAA1O43292 621 aa24.89■■□□□ 1.58
RITA1-201ENST00000548278 TTLL5Q6EMB2 1281 aa24.89■■□□□ 1.58
RITA1-201ENST00000548278 LRRC4BQ9NT99 713 aa24.89■■□□□ 1.58
RITA1-201ENST00000548278 BSDC1Q9NW68 430 aaPredicted RBP24.89■■□□□ 1.58
RITA1-201ENST00000548278 IDH1O75874 414 aaKnown RBP24.89■■□□□ 1.57
RITA1-201ENST00000548278 CTNNA3Q9UI47 895 aa24.89■■□□□ 1.57
RITA1-201ENST00000548278 E7EWF7 191 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 SYT1P21579 422 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 GJB2P29033 226 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 BCAMP50895 628 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 Q6ZUG5 572 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 DOCK2Q92608 1830 aa24.88■■□□□ 1.57
RITA1-201ENST00000548278 PDE6AP16499 860 aa24.87■■□□□ 1.57
RITA1-201ENST00000548278 TRAPPC3LQ5T215 181 aa24.87■■□□□ 1.57
RITA1-201ENST00000548278 FAM196AQ6ZSG2 479 aa24.87■■□□□ 1.57
RITA1-201ENST00000548278 DHX32Q7L7V1 743 aaKnown RBP24.87■■□□□ 1.57
RITA1-201ENST00000548278 WWC3Q9ULE0 1092 aa24.87■■□□□ 1.57
RITA1-201ENST00000548278 TCRBV5S4A2TA0A5A2 114 aa24.87■■□□□ 1.57
RITA1-201ENST00000548278 STX6O43752 255 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms