RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 LIG1P18858 919 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 BLOC1S2Q6QNY1 142 aa13.56□□□□□ -0.24
DDB1-224ENST00000545894 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
DDB1-224ENST00000545894 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 CAMK4Q16566 473 aa13.56□□□□□ -0.24
DDB1-224ENST00000545894 ALDH8A1Q9H2A2 487 aaPredicted RBP13.56□□□□□ -0.24
DDB1-224ENST00000545894 TNMDQ9H2S6 317 aa13.56□□□□□ -0.24
DDB1-224ENST00000545894 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
DDB1-224ENST00000545894 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 RPS6KB1P23443 525 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 MYH14Q7Z406 1995 aaKnown RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 SASH1O94885 1247 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 G3BP1Q13283 466 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■□□□ 12.4
DDB1-224ENST00000545894 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 COPS6Q7L5N1 327 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
DDB1-224ENST00000545894 SPATA32Q96LK8 384 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
DDB1-224ENST00000545894 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
DDB1-224ENST00000545894 PTGS1P23219 599 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 FSD1Q9BTV5 496 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
DDB1-224ENST00000545894 A0A0D9SFI3 127 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 GRM8O00222 908 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 CKAP2LQ8IYA6 745 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 HMG20BQ9P0W2 317 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 TOB2Q14106 344 aaPredicted RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 TRAPPC3LQ5T215 181 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
DDB1-224ENST00000545894 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 COL15A1P39059 1388 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 UTYO14607 1347 aa13.53□□□□□ -0.24
DDB1-224ENST00000545894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.24
DDB1-224ENST00000545894 TCEANC2Q96MN5 208 aa13.52□□□□□ -0.24
DDB1-224ENST00000545894 TFIP11Q9UBB9 837 aaKnown RBP13.52□□□□□ -0.24
DDB1-224ENST00000545894 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.24
DDB1-224ENST00000545894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.24
DDB1-224ENST00000545894 SOCS7O14512 581 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.25
DDB1-224ENST00000545894 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
DDB1-224ENST00000545894 PDCL2Q8N4E4 241 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
DDB1-224ENST00000545894 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.25
DDB1-224ENST00000545894 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
DDB1-224ENST00000545894 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 ZNF75DP51815 510 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 ANKRD7Q92527 254 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 A0A087WZG4 1122 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 UTP14CQ5TAP6 766 aaKnown RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 SRP68Q9UHB9 627 aaKnown RBP13.51□□□□□ -0.25
DDB1-224ENST00000545894 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
DDB1-224ENST00000545894 ADRA2BP18089 450 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 STK3Q13188 491 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 KRT32Q14532 448 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 CBX1P83916 185 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 DMTNQ08495 405 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 ANKRD13DQ6ZTN6 518 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms