RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 TNNI3KQ59H18 835 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 FPGT-TNNI3KV9GXZ4 949 aa20.13■□□□□ 0.81
LIMS2-217ENST00000545738 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
LIMS2-217ENST00000545738 TIAM2Q8IVF5 1701 aa20.12■□□□□ 0.81
LIMS2-217ENST00000545738 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
LIMS2-217ENST00000545738 GYG1P46976 350 aa20.12■□□□□ 0.81
LIMS2-217ENST00000545738 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-217ENST00000545738 ZNF646O15015 1829 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-217ENST00000545738 KCNJ4P48050 445 aa20.11■□□□□ 0.81
LIMS2-217ENST00000545738 KIF1BPQ96EK5 621 aa20.11■□□□□ 0.81
LIMS2-217ENST00000545738 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
LIMS2-217ENST00000545738 DBNDD1Q9H9R9 158 aa20.11■□□□□ 0.81
LIMS2-217ENST00000545738 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 RAB11FIP3O75154 756 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 DOK7Q18PE1 504 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 HSP90AB4PQ58FF6 505 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 C15orf52Q6ZUT6 534 aaKnown RBP20.1■□□□□ 0.81
LIMS2-217ENST00000545738 LPIN2Q92539 896 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
LIMS2-217ENST00000545738 KCNQ5Q9NR82 932 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
LIMS2-217ENST00000545738 LMNB1P20700 586 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 ERC1Q8IUD2 1116 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 DBNDD2Q9BQY9 259 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 LRRCC1Q9C099 1032 aa20.1■□□□□ 0.81
LIMS2-217ENST00000545738 CCDC8Q9H0W5 538 aaPredicted RBP20.1■□□□□ 0.81
LIMS2-217ENST00000545738 BCAMP50895 628 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 SUPT20HQ8NEM7 779 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 GCC1Q96CN9 775 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 XAGE2Q96GT9 111 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 GPR108Q9NPR9 543 aa20.09■□□□□ 0.81
LIMS2-217ENST00000545738 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
LIMS2-217ENST00000545738 LARGE2Q8N3Y3 721 aa20.08■□□□□ 0.81
LIMS2-217ENST00000545738 OTUD7AQ8TE49 926 aaPredicted RBP20.08■□□□□ 0.81
LIMS2-217ENST00000545738 ZC3H12CQ9C0D7 883 aaKnown RBP20.08■□□□□ 0.81
LIMS2-217ENST00000545738 RNF181Q9P0P0 153 aa20.08■□□□□ 0.81
LIMS2-217ENST00000545738 COL1A1P02452 1464 aaPredicted RBP20.08■□□□□ 0.81
LIMS2-217ENST00000545738 SLC5A1P13866 664 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 PHKA1P46020 1223 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 FBXO33Q7Z6M2 555 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 AACSQ86V21 672 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 EYA3Q99504 573 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-217ENST00000545738 AKAP2Q9Y2D5 859 aa20.07■□□□□ 0.8
LIMS2-217ENST00000545738 ECE2O60344 883 aa20.06■□□□□ 0.8
LIMS2-217ENST00000545738 IFIT1P09914 478 aaKnown RBP20.06■□□□□ 0.8
LIMS2-217ENST00000545738 CD209Q9NNX6 404 aa20.06■□□□□ 0.8
LIMS2-217ENST00000545738 PSME4Q14997 1843 aa20.06■□□□□ 0.8
LIMS2-217ENST00000545738 ERICH6BQ5W0A0 696 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 CCDC102BQ68D86 513 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 VPS33BQ9H267 617 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 ZNF541Q9H0D2 1346 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 AKAP11Q9UKA4 1901 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 NUCB1Q02818 461 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 CLASRPQ8N2M8 674 aaKnown RBP20.05■□□□□ 0.8
LIMS2-217ENST00000545738 CCDC136Q96JN2 1154 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 LNPKQ9C0E8 428 aa20.05■□□□□ 0.8
LIMS2-217ENST00000545738 SALL3Q9BXA9 1300 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 FZD9O00144 591 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 HIBADHP31937 336 aaKnown RBP20.04■□□□□ 0.8
LIMS2-217ENST00000545738 SCARF1Q14162 830 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 MYH13Q9UKX3 1938 aa20.04■□□□□ 0.8
LIMS2-217ENST00000545738 IL1R1P14778 569 aa20.03■□□□□ 0.8
LIMS2-217ENST00000545738 PI16Q6UXB8 463 aa20.03■□□□□ 0.8
LIMS2-217ENST00000545738 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
LIMS2-217ENST00000545738 NIM1KQ8IY84 436 aa20.02■□□□□ 0.8
LIMS2-217ENST00000545738 TDRD7Q8NHU6 1098 aaKnown RBP20.02■□□□□ 0.8
LIMS2-217ENST00000545738 ZNF804AQ7Z570 1209 aa20.02■□□□□ 0.79
LIMS2-217ENST00000545738 CHD1LQ86WJ1 897 aa20.02■□□□□ 0.79
LIMS2-217ENST00000545738 MXD3Q9BW11 206 aa20.02■□□□□ 0.79
LIMS2-217ENST00000545738 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.79
LIMS2-217ENST00000545738 RAD17O75943 681 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 PDE4AP27815 886 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 CXCL9Q07325 125 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 CAVIN4Q5BKX8 364 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 JDP2Q8WYK2 163 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 NDUFB9Q9Y6M9 179 aa20.01■□□□□ 0.79
LIMS2-217ENST00000545738 MCAMP43121 646 aa20■□□□□ 0.79
LIMS2-217ENST00000545738 PODNQ7Z5L7 613 aa20■□□□□ 0.79
LIMS2-217ENST00000545738 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
LIMS2-217ENST00000545738 IFIT2P09913 472 aaKnown RBP19.99■□□□□ 0.79
LIMS2-217ENST00000545738 ARID4AP29374 1257 aaPredicted RBP19.99■□□□□ 0.79
LIMS2-217ENST00000545738 PSMD14O00487 310 aa19.99■□□□□ 0.79
LIMS2-217ENST00000545738 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
LIMS2-217ENST00000545738 VPS37DQ86XT2 251 aa19.99■□□□□ 0.79
LIMS2-217ENST00000545738 MYO5AQ9Y4I1 1855 aaKnown RBP19.98■□□□□ 0.79
LIMS2-217ENST00000545738 GTF2IP78347 998 aa19.98■□□□□ 0.79
LIMS2-217ENST00000545738 GRIK5Q16478 980 aa19.98■□□□□ 0.79
LIMS2-217ENST00000545738 CERS5Q8N5B7 392 aa19.98■□□□□ 0.79
LIMS2-217ENST00000545738 DACT2Q5SW24 774 aa19.97■□□□□ 0.79
LIMS2-217ENST00000545738 HMG20BQ9P0W2 317 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms