RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 GOLGA8QA0A0J9YX86 632 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 CTAGE9A4FU28 777 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 GOLGA8OA6NCC3 632 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 GOLGA8NF8WBI6 632 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 EBAG9O00559 213 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 PHEXP78562 749 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 SPAG1Q07617 926 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 MCUR1Q96AQ8 359 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TRIM56Q9BRZ2 755 aaKnown RBP10.28□□□□□ -0.76
TSC1-208ENST00000545250 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TRIML1Q8N9V2 468 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TRIM6Q9C030 488 aaPredicted RBP10.28□□□□□ -0.76
TSC1-208ENST00000545250 ZNF277Q9NRM2 450 aaPredicted RBP10.28□□□□□ -0.76
TSC1-208ENST00000545250 FAM200AQ8TCP9 573 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 ANGPTL3Q9Y5C1 460 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 SRGAP3O43295 1099 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 OATP04181 439 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TRIM60Q495X7 471 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 CCDC138Q96M89 665 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 IRAK4Q9NWZ3 460 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TSPY2A6NKD2 308 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 SPDYE3A6NKU9 549 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
TSC1-208ENST00000545250 GNAQP50148 359 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
TSC1-208ENST00000545250 PAWRQ96IZ0 340 aaKnown RBP10.27□□□□□ -0.76
TSC1-208ENST00000545250 HSPA8P11142 646 aaKnown RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 UAP1Q16222 522 aaPredicted RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 CRNKL1Q9BZJ0 848 aaKnown RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 USP47Q96K76 1375 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 CTAGE15A4D2H0 777 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 CTAGE8P0CG41 777 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 CTAGE4Q8IX94 777 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 TUBBP07437 444 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 XAB2Q9HCS7 855 aaKnown RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 POLE3Q9NRF9 147 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 F8W8V4 182 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 PPFIA1Q13136 1202 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 LIN9Q5TKA1 542 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 DDX19AQ9NUU7 478 aaKnown RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 FRMD4BQ9Y2L6 1034 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 A6NNZ2 444 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 TNNC1P63316 161 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 TAF11Q15544 211 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 CAMK4Q16566 473 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 TUBB8Q3ZCM7 444 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 IPO11Q9UI26 975 aaKnown RBP10.27□□□□□ -0.77
TSC1-208ENST00000545250 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.77
TSC1-208ENST00000545250 B4GALNT4Q76KP1 1039 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 KRT86O43790 486 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 TUBB4AP04350 444 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 ARHGAP25P42331 645 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 TTC31Q49AM3 519 aaPredicted RBP10.26□□□□□ -0.77
TSC1-208ENST00000545250 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 N4BP3O15049 544 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 FBXW4P57775 412 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 ZSCAN32Q9NX65 697 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 TMTC4Q5T4D3 741 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 RASSF2P50749 326 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 TMC6Q7Z403 805 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 PPP4R1Q8TF05 950 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 A0A1B0GUL7 405 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 PSMA7O14818 248 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 ZNF365Q70YC5 407 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 GLRX3O76003 335 aaKnown RBP10.26□□□□□ -0.77
TSC1-208ENST00000545250 VAV2P52735 878 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
TSC1-208ENST00000545250 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
TSC1-208ENST00000545250 CARD10Q9BWT7 1032 aa10.26□□□□□ -0.77
TSC1-208ENST00000545250 FYCO1Q9BQS8 1478 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 ACBD5Q5T8D3 534 aaPredicted RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 CCDC25Q86WR0 208 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 DAAM1Q9Y4D1 1078 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 TNNI2P48788 182 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 S100BP04271 92 aaPredicted RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 MAP3K7O43318 606 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 DKC1O60832 514 aaKnown RBP eCLIP10.25□□□□□ -0.77
TSC1-208ENST00000545250 TRIM55Q9BYV6 548 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 TBCCQ15814 346 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 KIF1BPQ96EK5 621 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 FNBP1Q96RU3 617 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 TSPY3P0CV98 308 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 TSPY8P0CW00 308 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 SMTNP53814 917 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 PDXDC1Q6P996 788 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms