RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 API5Q9BZZ5 524 aaKnown RBP21.31■■□□□ 1
HOXD8-204ENST00000544999 USP44Q9H0E7 712 aa21.31■■□□□ 1
HOXD8-204ENST00000544999 BICC1Q9H694 974 aaKnown RBP21.31■■□□□ 1
HOXD8-204ENST00000544999 CNTNAP1P78357 1384 aa21.31■■□□□ 1
HOXD8-204ENST00000544999 TAF5LO75529 589 aa21.3■■□□□ 1
HOXD8-204ENST00000544999 KLRK1P26718 216 aa21.3■■□□□ 1
HOXD8-204ENST00000544999 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
HOXD8-204ENST00000544999 TBC1D10BQ4KMP7 808 aaPredicted RBP21.3■■□□□ 1
HOXD8-204ENST00000544999 C15orf52Q6ZUT6 534 aaKnown RBP21.3■■□□□ 1
HOXD8-204ENST00000544999 CNNM1Q9NRU3 951 aa21.3■■□□□ 1
HOXD8-204ENST00000544999 MKRN1Q9UHC7 482 aaKnown RBP21.3■■□□□ 1
HOXD8-204ENST00000544999 ZNF646O15015 1829 aaPredicted RBP21.29■■□□□ 1
HOXD8-204ENST00000544999 KIF4BQ2VIQ3 1234 aa21.29■■□□□ 1
HOXD8-204ENST00000544999 ANKRD44Q8N8A2 993 aa21.29■■□□□ 1
HOXD8-204ENST00000544999 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
HOXD8-204ENST00000544999 GMLQ99445 158 aa21.29■■□□□ 1
HOXD8-204ENST00000544999 KIF16BQ96L93 1317 aa21.29■■□□□ 1
HOXD8-204ENST00000544999 IRS2Q9Y4H2 1338 aa21.29■■□□□ 1
HOXD8-204ENST00000544999 TRAF5O00463 557 aa21.28■■□□□ 1
HOXD8-204ENST00000544999 EGFRP00533 1210 aa21.28■■□□□ 1
HOXD8-204ENST00000544999 ZNF280AP59817 542 aaPredicted RBP21.28■■□□□ 1
HOXD8-204ENST00000544999 FMR1Q06787 632 aaKnown RBP eCLIP21.28■■□□□ 1
HOXD8-204ENST00000544999 STRIP1Q5VSL9 837 aa21.28■■□□□ 1
HOXD8-204ENST00000544999 CDC37L1Q7L3B6 337 aa21.28■■□□□ 1
HOXD8-204ENST00000544999 GLIS2Q9BZE0 524 aaPredicted RBP21.28■■□□□ 1
HOXD8-204ENST00000544999 SNAP23O00161 211 aa21.27■■□□□ 1
HOXD8-204ENST00000544999 DACT2Q5SW24 774 aa21.27■■□□□ 1
HOXD8-204ENST00000544999 RBM26Q5T8P6 1007 aaKnown RBP21.27■■□□□ 1
HOXD8-204ENST00000544999 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
HOXD8-204ENST00000544999 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
HOXD8-204ENST00000544999 MYO3BQ8WXR4 1341 aa21.27■□□□□ 0.99
HOXD8-204ENST00000544999 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
HOXD8-204ENST00000544999 USP17L8P0C7I0 530 aa21.26■□□□□ 0.99
HOXD8-204ENST00000544999 FBXW7Q969H0 707 aa21.26■□□□□ 0.99
HOXD8-204ENST00000544999 CD209Q9NNX6 404 aa21.26■□□□□ 0.99
HOXD8-204ENST00000544999 PLIN1O60240 522 aa21.25■□□□□ 0.99
HOXD8-204ENST00000544999 CST9Q5W186 159 aa21.25■□□□□ 0.99
HOXD8-204ENST00000544999 TTLL5Q6EMB2 1281 aa21.25■□□□□ 0.99
HOXD8-204ENST00000544999 PUS3Q9BZE2 481 aaKnown RBP21.25■□□□□ 0.99
HOXD8-204ENST00000544999 ABT1Q9ULW3 272 aaKnown RBP21.25■□□□□ 0.99
HOXD8-204ENST00000544999 RIPOR2Q9Y4F9 1068 aa21.25■□□□□ 0.99
HOXD8-204ENST00000544999 UBE4AQ14139 1066 aa21.24■□□□□ 0.99
HOXD8-204ENST00000544999 DEFB115Q30KQ5 88 aa21.24■□□□□ 0.99
HOXD8-204ENST00000544999 ZNF804AQ7Z570 1209 aa21.24■□□□□ 0.99
HOXD8-204ENST00000544999 DCPSQ96C86 337 aaKnown RBP21.24■□□□□ 0.99
HOXD8-204ENST00000544999 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
HOXD8-204ENST00000544999 POLR2AP24928 1970 aaKnown RBP21.24■□□□□ 0.99
HOXD8-204ENST00000544999 MROH5Q6ZUA9 1318 aa21.24■□□□□ 0.99
HOXD8-204ENST00000544999 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
HOXD8-204ENST00000544999 UBTFL1P0CB47 393 aaPredicted RBP21.23■□□□□ 0.99
HOXD8-204ENST00000544999 MMP14P50281 582 aa21.23■□□□□ 0.99
HOXD8-204ENST00000544999 USP48Q86UV5 1035 aa21.23■□□□□ 0.99
HOXD8-204ENST00000544999 MXD3Q9BW11 206 aa21.23■□□□□ 0.99
HOXD8-204ENST00000544999 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
HOXD8-204ENST00000544999 IL1R1P14778 569 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 HOXD11P31277 338 aaPredicted RBP21.22■□□□□ 0.99
HOXD8-204ENST00000544999 VEGFBP49765 207 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 GTF2IP78347 998 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 KRT26Q7Z3Y9 468 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 GGA3Q9NZ52 723 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 TLL2Q9Y6L7 1015 aa21.22■□□□□ 0.99
HOXD8-204ENST00000544999 SCARF1Q14162 830 aa21.21■□□□□ 0.99
HOXD8-204ENST00000544999 LRRC24Q50LG9 513 aa21.21■□□□□ 0.99
HOXD8-204ENST00000544999 OGFOD1Q8N543 542 aa21.21■□□□□ 0.99
HOXD8-204ENST00000544999 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
HOXD8-204ENST00000544999 INTS3Q68E01 1043 aaKnown RBP21.2■□□□□ 0.98
HOXD8-204ENST00000544999 BCAR3O75815 825 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 HSPA1AP0DMV8 641 aaKnown RBP21.19■□□□□ 0.98
HOXD8-204ENST00000544999 HSPA1BP0DMV9 641 aaKnown RBP21.19■□□□□ 0.98
HOXD8-204ENST00000544999 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
HOXD8-204ENST00000544999 METTL24Q5JXM2 366 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 SULF1Q8IWU6 871 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 KLHDC4Q8TBB5 520 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 ZNF408Q9H9D4 720 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 HDAC9Q9UKV0 1011 aa21.19■□□□□ 0.98
HOXD8-204ENST00000544999 ASTN2O75129 1339 aaPredicted RBP21.19■□□□□ 0.98
HOXD8-204ENST00000544999 ADM5C9JUS6 153 aa21.18■□□□□ 0.98
HOXD8-204ENST00000544999 FKBP1AP62942 108 aaKnown RBP21.18■□□□□ 0.98
HOXD8-204ENST00000544999 ANGEL2Q5VTE6 544 aaKnown RBP21.18■□□□□ 0.98
HOXD8-204ENST00000544999 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
HOXD8-204ENST00000544999 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
HOXD8-204ENST00000544999 PITPNM2Q9BZ72 1349 aa21.18■□□□□ 0.98
HOXD8-204ENST00000544999 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
HOXD8-204ENST00000544999 PDE8BO95263 885 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 TRIM27P14373 513 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 ECE1P42892 770 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 PTPN12Q05209 780 aaKnown RBP21.17■□□□□ 0.98
HOXD8-204ENST00000544999 SAPCD2Q86UD0 394 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 KIAA0825Q8IV33 1275 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 HHIPL1Q96JK4 782 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 MEIS3Q99687 375 aa21.17■□□□□ 0.98
HOXD8-204ENST00000544999 EYA2O00167 538 aa21.16■□□□□ 0.98
HOXD8-204ENST00000544999 HIBADHP31937 336 aaKnown RBP21.16■□□□□ 0.98
HOXD8-204ENST00000544999 DLK2Q6UY11 383 aa21.16■□□□□ 0.98
HOXD8-204ENST00000544999 TDRD7Q8NHU6 1098 aaKnown RBP21.16■□□□□ 0.98
HOXD8-204ENST00000544999 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
HOXD8-204ENST00000544999 FAM84BQ96KN1 310 aaPredicted RBP21.16■□□□□ 0.98
HOXD8-204ENST00000544999 LRRFIP2Q9Y608 721 aaKnown RBP21.16■□□□□ 0.98
HOXD8-204ENST00000544999 FAM205AQ6ZU69 1335 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms