RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PODNQ7Z5L7 613 aa23.83■■□□□ 1.41
DDX55-211ENST00000544429 KCNQ5Q9NR82 932 aa23.83■■□□□ 1.41
DDX55-211ENST00000544429 VEGFAP15692 232 aaPredicted RBP23.82■■□□□ 1.4
DDX55-211ENST00000544429 FGFR2P21802 821 aa23.82■■□□□ 1.4
DDX55-211ENST00000544429 SCNN1DP51172 638 aa23.82■■□□□ 1.4
DDX55-211ENST00000544429 CIAPIN1Q6FI81 312 aa23.82■■□□□ 1.4
DDX55-211ENST00000544429 COA1Q9GZY4 146 aa23.82■■□□□ 1.4
DDX55-211ENST00000544429 RAD17O75943 681 aa23.81■■□□□ 1.4
DDX55-211ENST00000544429 KCNJ4P48050 445 aa23.81■■□□□ 1.4
DDX55-211ENST00000544429 METTL24Q5JXM2 366 aa23.81■■□□□ 1.4
DDX55-211ENST00000544429 CEP85Q6P2H3 762 aa23.81■■□□□ 1.4
DDX55-211ENST00000544429 IL15P40933 162 aaPredicted RBP23.8■■□□□ 1.4
DDX55-211ENST00000544429 TNIP1Q15025 636 aa23.8■■□□□ 1.4
DDX55-211ENST00000544429 SIL1Q9H173 461 aa23.8■■□□□ 1.4
DDX55-211ENST00000544429 ADAMTSL1Q8N6G6 1762 aa23.8■■□□□ 1.4
DDX55-211ENST00000544429 PSMD14O00487 310 aa23.79■■□□□ 1.4
DDX55-211ENST00000544429 VIL1P09327 827 aaKnown RBP23.79■■□□□ 1.4
DDX55-211ENST00000544429 GJA3Q9Y6H8 435 aa23.79■■□□□ 1.4
DDX55-211ENST00000544429 ARAP2Q8WZ64 1704 aa23.79■■□□□ 1.4
DDX55-211ENST00000544429 IQCA1LA6NCM1 817 aa23.78■■□□□ 1.4
DDX55-211ENST00000544429 CHMP4BQ9H444 224 aaKnown RBP23.78■■□□□ 1.4
DDX55-211ENST00000544429 CD209Q9NNX6 404 aa23.78■■□□□ 1.4
DDX55-211ENST00000544429 IL1R1P14778 569 aa23.77■■□□□ 1.4
DDX55-211ENST00000544429 PUM3Q15397 648 aaKnown RBP23.77■■□□□ 1.4
DDX55-211ENST00000544429 FAM84BQ96KN1 310 aaPredicted RBP23.77■■□□□ 1.4
DDX55-211ENST00000544429 TAF1DQ9H5J8 278 aaPredicted RBP23.77■■□□□ 1.4
DDX55-211ENST00000544429 GMPSP49915 693 aaPredicted RBP23.76■■□□□ 1.39
DDX55-211ENST00000544429 DPF2Q92785 391 aa23.76■■□□□ 1.39
DDX55-211ENST00000544429 GPRC5DQ9NZD1 345 aa23.76■■□□□ 1.39
DDX55-211ENST00000544429 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
DDX55-211ENST00000544429 NOP58Q9Y2X3 529 aaKnown RBP23.76■■□□□ 1.39
DDX55-211ENST00000544429 G3V3G9 751 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 TOMM70O94826 608 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 RPS12P25398 132 aaKnown RBP23.75■■□□□ 1.39
DDX55-211ENST00000544429 DCAF8Q5TAQ9 597 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 FBXO33Q7Z6M2 555 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 SIRT2Q8IXJ6 389 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 GMLQ99445 158 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 CEP126Q9P2H0 1117 aa23.75■■□□□ 1.39
DDX55-211ENST00000544429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.75■■□□□ 1.39
DDX55-211ENST00000544429 USP17L3A6NCW0 530 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 USP17L4A6NCW7 530 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 DACT2Q5SW24 774 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 STRIP1Q5VSL9 837 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 USP17L1Q7RTZ2 530 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 ZNF804AQ7Z570 1209 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 RPAP2Q8IXW5 612 aaPredicted RBP23.74■■□□□ 1.39
DDX55-211ENST00000544429 LPIN2Q92539 896 aa23.74■■□□□ 1.39
DDX55-211ENST00000544429 EPHX2P34913 555 aa23.73■■□□□ 1.39
DDX55-211ENST00000544429 EPS15P42566 896 aa23.73■■□□□ 1.39
DDX55-211ENST00000544429 GYG1P46976 350 aa23.73■■□□□ 1.39
DDX55-211ENST00000544429 RSBN1LQ6PCB5 846 aaPredicted RBP23.73■■□□□ 1.39
DDX55-211ENST00000544429 TDRD7Q8NHU6 1098 aaKnown RBP23.73■■□□□ 1.39
DDX55-211ENST00000544429 ZBTB12Q9Y330 459 aaPredicted RBP23.73■■□□□ 1.39
DDX55-211ENST00000544429 ZBTB22O15209 634 aa23.72■■□□□ 1.39
DDX55-211ENST00000544429 SASH1O94885 1247 aa23.72■■□□□ 1.39
DDX55-211ENST00000544429 HIBADHP31937 336 aaKnown RBP23.72■■□□□ 1.39
DDX55-211ENST00000544429 RBM46Q8TBY0 533 aaKnown RBP23.72■■□□□ 1.39
DDX55-211ENST00000544429 TFCP2Q12800 502 aa23.71■■□□□ 1.39
DDX55-211ENST00000544429 ATP2B3Q16720 1220 aa23.71■■□□□ 1.39
DDX55-211ENST00000544429 AGBL3Q8NEM8 1001 aa23.71■■□□□ 1.39
DDX55-211ENST00000544429 IFIT1P09914 478 aaKnown RBP23.7■■□□□ 1.38
DDX55-211ENST00000544429 SLC5A1P13866 664 aa23.7■■□□□ 1.38
DDX55-211ENST00000544429 LMOD1P29536 600 aaPredicted RBP23.7■■□□□ 1.38
DDX55-211ENST00000544429 MYH13Q9UKX3 1938 aa23.69■■□□□ 1.38
DDX55-211ENST00000544429 FAM205AQ6ZU69 1335 aa23.69■■□□□ 1.38
DDX55-211ENST00000544429 POTEIP0CG38 1075 aa23.69■■□□□ 1.38
DDX55-211ENST00000544429 POTEJP0CG39 1038 aa23.69■■□□□ 1.38
DDX55-211ENST00000544429 G3BP1Q13283 466 aaKnown RBP eCLIP23.69■■□□□ 1.38
DDX55-211ENST00000544429 TTLL5Q6EMB2 1281 aa23.69■■□□□ 1.38
DDX55-211ENST00000544429 PNMA8AQ86V59 439 aaPredicted RBP23.69■■□□□ 1.38
DDX55-211ENST00000544429 ADARB2Q9NS39 739 aaKnown RBP23.69■■□□□ 1.38
DDX55-211ENST00000544429 CNOT7Q9UIV1 285 aaKnown RBP23.69■■□□□ 1.38
DDX55-211ENST00000544429 MYO3BQ8WXR4 1341 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 SHTN1A0MZ66 631 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 SURF6O75683 361 aaKnown RBP23.68■■□□□ 1.38
DDX55-211ENST00000544429 BCAMP50895 628 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 C1QTNF8P60827 252 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 FKBP1AP62942 108 aaKnown RBP23.68■■□□□ 1.38
DDX55-211ENST00000544429 GTF2IP78347 998 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 CAVIN4Q5BKX8 364 aa23.68■■□□□ 1.38
DDX55-211ENST00000544429 USP50Q70EL3 339 aaPredicted RBP23.68■■□□□ 1.38
DDX55-211ENST00000544429 ZNF280AP59817 542 aaPredicted RBP23.67■■□□□ 1.38
DDX55-211ENST00000544429 MICALL2Q8IY33 904 aa23.67■■□□□ 1.38
DDX55-211ENST00000544429 C16orf71Q8IYS4 520 aaPredicted RBP23.67■■□□□ 1.38
DDX55-211ENST00000544429 GPR108Q9NPR9 543 aa23.67■■□□□ 1.38
DDX55-211ENST00000544429 AKAP2Q9Y2D5 859 aa23.67■■□□□ 1.38
DDX55-211ENST00000544429 A0A1B0GUL7 405 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 TIMM10P62072 90 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 LDHDQ86WU2 507 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 CERS5Q8N5B7 392 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 CRBNQ96SW2 442 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 MXD3Q9BW11 206 aa23.66■■□□□ 1.38
DDX55-211ENST00000544429 FSTL1Q12841 308 aa23.65■■□□□ 1.38
DDX55-211ENST00000544429 COL1A1P02452 1464 aaPredicted RBP23.64■■□□□ 1.38
DDX55-211ENST00000544429 H7C1D1 291 aa23.64■■□□□ 1.37
DDX55-211ENST00000544429 HMMRO75330 724 aa23.64■■□□□ 1.37
DDX55-211ENST00000544429 ADORA1P30542 326 aa23.64■■□□□ 1.37
DDX55-211ENST00000544429 HIRAP54198 1017 aaPredicted RBP23.64■■□□□ 1.37
DDX55-211ENST00000544429 SMC1BQ8NDV3 1235 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms