RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
GABPB1-206ENST00000543881 G2E3Q7L622 706 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 PI4KAP1Q8N8J0 262 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
GABPB1-206ENST00000543881 IL16Q14005 1332 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 PRAMEF18Q5VWM3 479 aa15.24■□□□□ 0.03
GABPB1-206ENST00000543881 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
GABPB1-206ENST00000543881 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
GABPB1-206ENST00000543881 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
GABPB1-206ENST00000543881 USP17L4A6NCW7 530 aa15.23■□□□□ 0.03
GABPB1-206ENST00000543881 PDE8AO60658 829 aa15.23■□□□□ 0.03
GABPB1-206ENST00000543881 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
GABPB1-206ENST00000543881 USP17L1Q7RTZ2 530 aa15.23■□□□□ 0.03
GABPB1-206ENST00000543881 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-206ENST00000543881 GPR25O00155 361 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 TM4SF4P48230 202 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-206ENST00000543881 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 PODNQ7Z5L7 613 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-206ENST00000543881 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
GABPB1-206ENST00000543881 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
GABPB1-206ENST00000543881 ATP2B4P23634 1241 aa15.21■□□□□ 0.03
GABPB1-206ENST00000543881 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
GABPB1-206ENST00000543881 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
GABPB1-206ENST00000543881 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.03
GABPB1-206ENST00000543881 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
GABPB1-206ENST00000543881 XDHP47989 1333 aa15.21■□□□□ 0.03
GABPB1-206ENST00000543881 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
GABPB1-206ENST00000543881 ANKRD18AQ8IVF6 992 aa15.2■□□□□ 0.02
GABPB1-206ENST00000543881 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
GABPB1-206ENST00000543881 NEURL1BA8MQ27 555 aa15.2■□□□□ 0.02
GABPB1-206ENST00000543881 NF2P35240 595 aa15.2■□□□□ 0.02
GABPB1-206ENST00000543881 WDR63Q8IWG1 891 aa15.2■□□□□ 0.02
GABPB1-206ENST00000543881 VAMP4O75379 141 aa15.19■□□□□ 0.02
GABPB1-206ENST00000543881 CTSWP56202 376 aa15.19■□□□□ 0.02
GABPB1-206ENST00000543881 SREBF2Q12772 1141 aa15.19■□□□□ 0.02
GABPB1-206ENST00000543881 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
GABPB1-206ENST00000543881 WTIPA6NIX2 430 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-206ENST00000543881 WNT10BO00744 389 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 FKTNO75072 461 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 EXOSC9Q06265 439 aaKnown RBP15.18■□□□□ 0.02
GABPB1-206ENST00000543881 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 FLIIQ13045 1269 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 TTLL11Q8NHH1 800 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 MXD3Q9BW11 206 aa15.18■□□□□ 0.02
GABPB1-206ENST00000543881 H7C1W4 665 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 DACT2Q5SW24 774 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 FAM9BQ8IZU0 186 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 CFHR5Q9BXR6 569 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 R3HDMLQ9H3Y0 253 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 GREM2Q9H772 168 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
GABPB1-206ENST00000543881 ZNF646O15015 1829 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-206ENST00000543881 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
GABPB1-206ENST00000543881 ARMC9Q7Z3E5 817 aa15.16■□□□□ 0.02
GABPB1-206ENST00000543881 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
GABPB1-206ENST00000543881 CDC5LQ99459 802 aaKnown RBP15.16■□□□□ 0.02
GABPB1-206ENST00000543881 MYO3BQ8WXR4 1341 aa15.16■□□□□ 0.02
GABPB1-206ENST00000543881 CASP7P55210 303 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
GABPB1-206ENST00000543881 PRKG1Q13976 671 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 GCKRQ14397 625 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 SPEF2Q9C093 1822 aa15.15■□□□□ 0.02
GABPB1-206ENST00000543881 SASH1O94885 1247 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-206ENST00000543881 MYH3P11055 1940 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 CCT4P50991 539 aaKnown RBP15.14■□□□□ 0.01
GABPB1-206ENST00000543881 LDLRAD1Q5T700 205 aa15.14■□□□□ 0.01
GABPB1-206ENST00000543881 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
GABPB1-206ENST00000543881 ANGEL1Q9UNK9 670 aaKnown RBP15.14■□□□□ 0.01
GABPB1-206ENST00000543881 MMP14P50281 582 aa15.13■□□□□ 0.01
GABPB1-206ENST00000543881 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
GABPB1-206ENST00000543881 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
GABPB1-206ENST00000543881 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
GABPB1-206ENST00000543881 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
GABPB1-206ENST00000543881 F6X3S4 739 aa15.12■□□□□ 0.01
GABPB1-206ENST00000543881 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
GABPB1-206ENST00000543881 TXNRD3Q86VQ6 643 aa15.12■□□□□ 0.01
GABPB1-206ENST00000543881 KIAA0825Q8IV33 1275 aa15.12■□□□□ 0.01
GABPB1-206ENST00000543881 POTEFA5A3E0 1075 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 MANSC4A6NHS7 340 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-206ENST00000543881 CSF1RP07333 972 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 INHBEP58166 350 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
GABPB1-206ENST00000543881 OTOP1Q7RTM1 612 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 IFNL1Q8IU54 200 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 LEMD3Q9Y2U8 911 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
GABPB1-206ENST00000543881 ITGA6P23229 1130 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms