RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GOLGA6L9A6NEM1 432 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 ZBTB43O43298 467 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 IGHMBP2P38935 993 aaKnown RBP9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 MAP4K1Q92918 833 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 ABCA6Q8N139 1617 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 KAT6BQ8WYB5 2073 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 A0A0D9SFI3 127 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 POLR3GO15318 223 aaPredicted RBP9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 RAD21O60216 631 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 HSP90AB3PQ58FF7 597 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 NCOA5Q9HCD5 579 aaKnown RBP9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 IGSF3O75054 1194 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 TUBB4AP04350 444 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 ATP5JP18859 108 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 ATP2B3Q16720 1220 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 SLC9C2Q5TAH2 1124 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 BRAPQ7Z569 592 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 PDLIM2Q96JY6 352 aa9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 GTPBP4Q9BZE4 634 aaKnown RBP9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 RNF41Q9H4P4 317 aaPredicted RBP9.46□□□□□ -0.89
PRKAB1-207ENST00000542698 ABCC3O15438 1527 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 CLSTN1O94985 981 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 HSP90AA4PQ58FG1 418 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 NR1I2O75469 434 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 MFSD6Q6ZSS7 791 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 ARHGAP31Q2M1Z3 1444 aa9.46□□□□□ -0.9
PRKAB1-207ENST00000542698 IQCA1Q86XH1 822 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 TEX13AQ9BXU3 409 aaPredicted RBP9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 TMX1Q9H3N1 280 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 MED14O60244 1454 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 SETBP1Q9Y6X0 1596 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 AXDND1Q5T1B0 1012 aaPredicted RBP9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 JAKMIP3Q5VZ66 844 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 NAA16Q6N069 864 aaPredicted RBP9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 OGFRQ9NZT2 677 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 RANBP6O60518 1105 aaKnown RBP9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 SLC5A1P13866 664 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 SYT10Q6XYQ8 523 aa9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 ZNF397Q8NF99 534 aaPredicted RBP9.45□□□□□ -0.9
PRKAB1-207ENST00000542698 PPRC1Q5VV67 1664 aaKnown RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 NEURL4Q96JN8 1562 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 A0A1B0GUL7 405 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 LRMPQ12912 555 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 SKIDA1Q1XH10 827 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 PI4K2BQ8TCG2 481 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 GBP3Q9H0R5 595 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 CALCOCO1Q9P1Z2 691 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 EYA2O00167 538 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 DDIT3P35638 169 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 ZCRB1Q8TBF4 217 aaKnown RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 CDK5RAP3Q96JB5 506 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 PLBD2Q8NHP8 589 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 CTCFLQ8NI51 663 aaPredicted RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 CCDC12Q8WUD4 166 aaPredicted RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 SRRTQ9BXP5 876 aaKnown RBP9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 DEF6Q9H4E7 631 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 USP6P35125 1406 aa9.44□□□□□ -0.9
PRKAB1-207ENST00000542698 UQCRFS1P1P0C7P4 283 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 SETQ01105 290 aaPredicted RBP9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 POLA2Q14181 598 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 OTUD7BQ6GQQ9 843 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 ROBO2Q9HCK4 1378 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 KIAA1210Q9ULL0 1709 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 ERO1AQ96HE7 468 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 ADGRB3O60242 1522 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 TAF5LO75529 589 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 WTAPQ15007 396 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 SEC62Q99442 399 aaKnown RBP9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 ARFGAP3Q9NP61 516 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 PYCARDQ9ULZ3 195 aa9.43□□□□□ -0.9
PRKAB1-207ENST00000542698 ELP1O95163 1332 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 LARGE1O95461 756 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 EPS15P42566 896 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 NECTIN1Q15223 517 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 CATIPQ7Z7H3 387 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 CCDC148Q8NFR7 591 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 ORAI2Q96SN7 254 aa9.42□□□□□ -0.9
PRKAB1-207ENST00000542698 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms