RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 OTUD7AQ8TE49 926 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 ZC3H15Q8WU90 426 aaKnown RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 CCDC87Q9NVE4 849 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 PA2G4Q9UQ80 394 aaKnown RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 ANKRD36CQ5JPF3 1778 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 A0A087WZG4 1122 aa9.62□□□□□ -0.87
AC005840.3-201ENST00000541888 GRM8O00222 908 aa9.62□□□□□ -0.87
AC005840.3-201ENST00000541888 PPP1R42Q7Z4L9 355 aa9.62□□□□□ -0.87
AC005840.3-201ENST00000541888 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
AC005840.3-201ENST00000541888 SRGAP3O43295 1099 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 ZMYND10O75800 440 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 GNAI3P08754 354 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 TSHZ3Q63HK5 1081 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 KIF6Q6ZMV9 814 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 SMC5Q8IY18 1101 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 SIL1Q9H173 461 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 RREB1Q92766 1687 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 TEX13AQ9BXU3 409 aaPredicted RBP9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 SRP68Q9UHB9 627 aaKnown RBP9.61□□□□□ -0.87
AC005840.3-201ENST00000541888 COL15A1P39059 1388 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 MAP3K15Q6ZN16 1313 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 UBN2Q6ZU65 1347 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 C4AP0C0L4 1744 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 C4BP0C0L5 1744 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 GCGRP47871 477 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 PUS10Q3MIT2 529 aaKnown RBP9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 SMARCC1Q92922 1105 aaPredicted RBP9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 UTRNP46939 3433 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 TAF1P21675 1872 aa9.6□□□□□ -0.87
AC005840.3-201ENST00000541888 ALDH1L1O75891 902 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 EIF5P55010 431 aaKnown RBP9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 ATP8B2P98198 1209 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 NUCB1Q02818 461 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 AAMPQ13685 434 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 FAM196AQ6ZSG2 479 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 NOP58Q9Y2X3 529 aaKnown RBP9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 CASZ1Q86V15 1759 aa9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 CICQ96RK0 1608 aaPredicted RBP9.59□□□□□ -0.87
AC005840.3-201ENST00000541888 NR1I2O75469 434 aa9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 IL6STP40189 918 aaPredicted RBP9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 RPAP2Q8IXW5 612 aaPredicted RBP9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 CWC25Q9NXE8 425 aaPredicted RBP9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 BCORQ6W2J9 1755 aa9.59□□□□□ -0.88
AC005840.3-201ENST00000541888 SPEF2Q9C093 1822 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 TNS1Q9HBL0 1735 aaKnown RBP9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 TLL1O43897 1013 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 SURF6O75683 361 aaKnown RBP9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 APBA3O96018 575 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 CASP7P55210 303 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 FUT2Q10981 343 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 TCIRG1Q13488 830 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 GIGYF2Q6Y7W6 1299 aaKnown RBP9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 DCTPP1Q9H773 170 aa9.58□□□□□ -0.88
AC005840.3-201ENST00000541888 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 TUBGCP6Q96RT7 1819 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 CAMTA2O94983 1202 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 USPL1Q5W0Q7 1092 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 LMBR1LQ6UX01 489 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 MYH3P11055 1940 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 COL4A1P02462 1669 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
AC005840.3-201ENST00000541888 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 UTYO14607 1347 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 CD46P15529 392 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 FOXO4P98177 505 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 TRMT112Q9UI30 125 aaKnown RBP9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 NIP7Q9Y221 180 aaKnown RBP eCLIP9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 SCN7AQ01118 1682 aa9.56□□□□□ -0.88
AC005840.3-201ENST00000541888 H7C1W4 665 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 HMMRO75330 724 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 GGCXP38435 758 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 OS9Q13438 667 aaPredicted RBP9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 TXNRD1Q16881 649 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 MORN1Q5T089 497 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 CCDC191Q8NCU4 936 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms