RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 LAMA4Q16363 1823 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 TTF1Q15361 905 aaPredicted RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 ZSCAN25Q6NSZ9 544 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
TSFM-207ENST00000540550 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
TSFM-207ENST00000540550 M0R2C6 588 aa17.71■□□□□ 0.43
TSFM-207ENST00000540550 LARGE1O95461 756 aa17.71■□□□□ 0.43
TSFM-207ENST00000540550 MCAMP43121 646 aa17.71■□□□□ 0.43
TSFM-207ENST00000540550 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
TSFM-207ENST00000540550 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
TSFM-207ENST00000540550 HELBQ8NG08 1087 aaPredicted RBP17.71■□□□□ 0.43
TSFM-207ENST00000540550 GNPATO15228 680 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 CYP21A2P08686 494 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 CCDC102BQ68D86 513 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 HSPD1P10809 573 aaKnown RBP17.7■□□□□ 0.42
TSFM-207ENST00000540550 FGFR2P21802 821 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
TSFM-207ENST00000540550 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 APPBP2Q92624 585 aa17.7■□□□□ 0.42
TSFM-207ENST00000540550 CDC5LQ99459 802 aaKnown RBP17.7■□□□□ 0.42
TSFM-207ENST00000540550 ZPR1O75312 459 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 GTF2E1P29083 439 aaPredicted RBP17.69■□□□□ 0.42
TSFM-207ENST00000540550 ERFEQ4G0M1 354 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
TSFM-207ENST00000540550 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
TSFM-207ENST00000540550 PHKA1P46020 1223 aa17.68■□□□□ 0.42
TSFM-207ENST00000540550 ME3Q16798 604 aa17.68■□□□□ 0.42
TSFM-207ENST00000540550 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
TSFM-207ENST00000540550 MYO5AQ9Y4I1 1855 aaKnown RBP17.68■□□□□ 0.42
TSFM-207ENST00000540550 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
TSFM-207ENST00000540550 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
TSFM-207ENST00000540550 CTNNA3Q9UI47 895 aa17.68■□□□□ 0.42
TSFM-207ENST00000540550 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
TSFM-207ENST00000540550 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
TSFM-207ENST00000540550 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
TSFM-207ENST00000540550 TBC1D9BQ66K14 1250 aa17.67■□□□□ 0.42
TSFM-207ENST00000540550 SEPT12Q8IYM1 358 aa17.67■□□□□ 0.42
TSFM-207ENST00000540550 A0A1B0GUL6 1792 aa17.67■□□□□ 0.42
TSFM-207ENST00000540550 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
TSFM-207ENST00000540550 GJB2P29033 226 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
TSFM-207ENST00000540550 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 ANKRD18AQ8IVF6 992 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 NECAB1Q8N987 351 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 FGD1P98174 961 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
TSFM-207ENST00000540550 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
TSFM-207ENST00000540550 LMBRD1Q9NUN5 540 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
TSFM-207ENST00000540550 DOCK2Q92608 1830 aa17.66■□□□□ 0.42
TSFM-207ENST00000540550 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 STX6O43752 255 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 PRPF40AO75400 957 aaKnown RBP17.65■□□□□ 0.42
TSFM-207ENST00000540550 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
TSFM-207ENST00000540550 ADD2P35612 726 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 CHRNDQ07001 517 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 COL9A3Q14050 684 aaPredicted RBP17.65■□□□□ 0.42
TSFM-207ENST00000540550 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 SPATA5Q8NB90 893 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
TSFM-207ENST00000540550 C4AP0C0L4 1744 aa17.65■□□□□ 0.42
TSFM-207ENST00000540550 ZSCAN22P10073 491 aaPredicted RBP17.64■□□□□ 0.42
TSFM-207ENST00000540550 SYT1P21579 422 aa17.64■□□□□ 0.42
TSFM-207ENST00000540550 Q6ZUG5 572 aa17.64■□□□□ 0.42
TSFM-207ENST00000540550 STOX1Q6ZVD7 989 aa17.64■□□□□ 0.42
TSFM-207ENST00000540550 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.42
TSFM-207ENST00000540550 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
TSFM-207ENST00000540550 UBE3CQ15386 1083 aa17.64■□□□□ 0.41
TSFM-207ENST00000540550 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
TSFM-207ENST00000540550 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
TSFM-207ENST00000540550 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
TSFM-207ENST00000540550 TAF1P21675 1872 aa17.64■□□□□ 0.41
TSFM-207ENST00000540550 E7EWF7 191 aa17.63■□□□□ 0.41
TSFM-207ENST00000540550 GPAA1O43292 621 aa17.63■□□□□ 0.41
TSFM-207ENST00000540550 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
TSFM-207ENST00000540550 IMMTQ16891 758 aaKnown RBP17.63■□□□□ 0.41
TSFM-207ENST00000540550 C3orf67Q6ZVT6 689 aa17.62■□□□□ 0.41
TSFM-207ENST00000540550 COL4A1P02462 1669 aa17.62■□□□□ 0.41
TSFM-207ENST00000540550 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
TSFM-207ENST00000540550 PDE6AP16499 860 aa17.62■□□□□ 0.41
TSFM-207ENST00000540550 STK3Q13188 491 aa17.62■□□□□ 0.41
TSFM-207ENST00000540550 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
TSFM-207ENST00000540550 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
TSFM-207ENST00000540550 BCL11BQ9C0K0 894 aaPredicted RBP17.62■□□□□ 0.41
TSFM-207ENST00000540550 ATP6V1DQ9Y5K8 247 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms