RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 MXD3Q9BW11 206 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
PUDP-206ENST00000540122 COL6A3P12111 3177 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 IRS4O14654 1257 aaPredicted RBP20.31■□□□□ 0.84
PUDP-206ENST00000540122 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
PUDP-206ENST00000540122 SP3Q02447 781 aa20.31■□□□□ 0.84
PUDP-206ENST00000540122 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
PUDP-206ENST00000540122 OGFOD1Q8N543 542 aa20.31■□□□□ 0.84
PUDP-206ENST00000540122 ATP5J2-PTCD1G3V325 749 aa20.3■□□□□ 0.84
PUDP-206ENST00000540122 SLC9C1Q4G0N8 1177 aa20.3■□□□□ 0.84
PUDP-206ENST00000540122 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
PUDP-206ENST00000540122 APOBEC3FQ8IUX4 373 aaKnown RBP20.3■□□□□ 0.84
PUDP-206ENST00000540122 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
PUDP-206ENST00000540122 NBPF11Q86T75 865 aa20.29■□□□□ 0.84
PUDP-206ENST00000540122 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
PUDP-206ENST00000540122 PTCH2Q9Y6C5 1203 aa20.29■□□□□ 0.84
PUDP-206ENST00000540122 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
PUDP-206ENST00000540122 PLBD2Q8NHP8 589 aa20.28■□□□□ 0.84
PUDP-206ENST00000540122 LAMB1P07942 1786 aa20.28■□□□□ 0.84
PUDP-206ENST00000540122 XDHP47989 1333 aa20.27■□□□□ 0.84
PUDP-206ENST00000540122 MYCP01106 439 aaPredicted RBP20.27■□□□□ 0.84
PUDP-206ENST00000540122 OTUD7BQ6GQQ9 843 aa20.27■□□□□ 0.84
PUDP-206ENST00000540122 SSC5DA1L4H1 1573 aa20.26■□□□□ 0.83
PUDP-206ENST00000540122 COL1A1P02452 1464 aaPredicted RBP20.26■□□□□ 0.83
PUDP-206ENST00000540122 ATP2B4P23634 1241 aa20.26■□□□□ 0.83
PUDP-206ENST00000540122 MYO3BQ8WXR4 1341 aa20.26■□□□□ 0.83
PUDP-206ENST00000540122 GJA5P36382 358 aa20.25■□□□□ 0.83
PUDP-206ENST00000540122 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
PUDP-206ENST00000540122 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
PUDP-206ENST00000540122 PTPN18Q99952 460 aa20.25■□□□□ 0.83
PUDP-206ENST00000540122 PRO3102Q9H379 93 aa20.25■□□□□ 0.83
PUDP-206ENST00000540122 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
PUDP-206ENST00000540122 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
PUDP-206ENST00000540122 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
PUDP-206ENST00000540122 MED23Q9ULK4 1368 aa20.23■□□□□ 0.83
PUDP-206ENST00000540122 TESPA1A2RU30 521 aaPredicted RBP20.23■□□□□ 0.83
PUDP-206ENST00000540122 WTIPA6NIX2 430 aaPredicted RBP20.23■□□□□ 0.83
PUDP-206ENST00000540122 MNX1P50219 401 aaPredicted RBP20.23■□□□□ 0.83
PUDP-206ENST00000540122 MMP14P50281 582 aa20.23■□□□□ 0.83
PUDP-206ENST00000540122 STRIP1Q5VSL9 837 aa20.23■□□□□ 0.83
PUDP-206ENST00000540122 DPF3Q92784 378 aa20.23■□□□□ 0.83
PUDP-206ENST00000540122 ZBED3Q96IU2 234 aaPredicted RBP20.23■□□□□ 0.83
PUDP-206ENST00000540122 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
PUDP-206ENST00000540122 CUL9Q8IWT3 2517 aa20.22■□□□□ 0.83
PUDP-206ENST00000540122 UNCXA6NJT0 531 aa20.22■□□□□ 0.83
PUDP-206ENST00000540122 PPP1R12BO60237 982 aaPredicted RBP20.22■□□□□ 0.83
PUDP-206ENST00000540122 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
PUDP-206ENST00000540122 ARHGEF6Q15052 776 aa20.22■□□□□ 0.83
PUDP-206ENST00000540122 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
PUDP-206ENST00000540122 SH3TC2Q8TF17 1288 aa20.22■□□□□ 0.83
PUDP-206ENST00000540122 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
PUDP-206ENST00000540122 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
PUDP-206ENST00000540122 CCDC85AQ96PX6 553 aaPredicted RBP20.21■□□□□ 0.83
PUDP-206ENST00000540122 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
PUDP-206ENST00000540122 ANKRD18AQ8IVF6 992 aa20.2■□□□□ 0.82
PUDP-206ENST00000540122 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
PUDP-206ENST00000540122 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
PUDP-206ENST00000540122 HSP90B1P14625 803 aaKnown RBP20.19■□□□□ 0.82
PUDP-206ENST00000540122 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
PUDP-206ENST00000540122 PPP2R3BQ9Y5P8 575 aa20.19■□□□□ 0.82
PUDP-206ENST00000540122 LAMA3Q16787 3333 aa20.18■□□□□ 0.82
PUDP-206ENST00000540122 COA1Q9GZY4 146 aa20.18■□□□□ 0.82
PUDP-206ENST00000540122 SOX1O00570 391 aaPredicted RBP20.17■□□□□ 0.82
PUDP-206ENST00000540122 IREB2P48200 963 aaKnown RBP20.17■□□□□ 0.82
PUDP-206ENST00000540122 PDE8AO60658 829 aa20.16■□□□□ 0.82
PUDP-206ENST00000540122 TAF1CQ15572 869 aaPredicted RBP20.16■□□□□ 0.82
PUDP-206ENST00000540122 SUPT20HL1Q3ZLR7 823 aa20.16■□□□□ 0.82
PUDP-206ENST00000540122 HDGFL1Q5TGJ6 251 aa20.16■□□□□ 0.82
PUDP-206ENST00000540122 MS4A4AQ96JQ5 239 aa20.16■□□□□ 0.82
PUDP-206ENST00000540122 ZFYVE28Q9HCC9 887 aa20.16■□□□□ 0.82
PUDP-206ENST00000540122 USP2O75604 605 aaPredicted RBP20.15■□□□□ 0.82
PUDP-206ENST00000540122 TTLL5Q6EMB2 1281 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 TXNRD3Q86VQ6 643 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 ANKRD13AQ8IZ07 590 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 OPTNQ96CV9 577 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 LRCH3Q96II8 777 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 ARHGAP39Q9C0H5 1083 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
PUDP-206ENST00000540122 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
PUDP-206ENST00000540122 A0A1W2PPC1 479 aa20.14■□□□□ 0.81
PUDP-206ENST00000540122 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
PUDP-206ENST00000540122 RIPK4P57078 832 aa20.14■□□□□ 0.81
PUDP-206ENST00000540122 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
PUDP-206ENST00000540122 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
PUDP-206ENST00000540122 NBPF12Q5TAG4 269 aaPredicted RBP20.14■□□□□ 0.81
PUDP-206ENST00000540122 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
PUDP-206ENST00000540122 HTATIP2Q9BUP3 242 aa20.14■□□□□ 0.81
PUDP-206ENST00000540122 MTFR1Q15390 333 aa20.13■□□□□ 0.81
PUDP-206ENST00000540122 JARID2Q92833 1246 aaPredicted RBP20.13■□□□□ 0.81
PUDP-206ENST00000540122 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
PUDP-206ENST00000540122 ELP3Q9H9T3 547 aa20.13■□□□□ 0.81
PUDP-206ENST00000540122 CLRN2A0PK11 232 aa20.12■□□□□ 0.81
PUDP-206ENST00000540122 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
PUDP-206ENST00000540122 PCCAP05165 728 aaPredicted RBP20.12■□□□□ 0.81
PUDP-206ENST00000540122 GTF2IP78347 998 aa20.12■□□□□ 0.81
PUDP-206ENST00000540122 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms