RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 STARD3NLO95772 234 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 PDCP20941 246 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 GPTP24298 496 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 SCARF1Q14162 830 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
C11orf54-214ENST00000540113 NUP98P52948 1817 aa13.63□□□□□ -0.23
C11orf54-214ENST00000540113 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 CSF1RP07333 972 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 HSPD1P10809 573 aaKnown RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 C17orf53Q8N3J3 647 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 HAND2P61296 217 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 CCDC57Q2TAC2 916 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 ZMYM1Q5SVZ6 1142 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 TTC12Q9H892 705 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-214ENST00000540113 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 MYH3P11055 1940 aa13.62□□□□□ -0.23
C11orf54-214ENST00000540113 E7EWF7 191 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 H3BQV1 296 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 GORABQ5T7V8 394 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-214ENST00000540113 OSBP2Q969R2 916 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 GOLGA6L4A6NEF3 574 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
C11orf54-214ENST00000540113 CTDNEP1O95476 244 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 SLIT2O94813 1529 aa13.61□□□□□ -0.23
C11orf54-214ENST00000540113 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 KDM4AO75164 1064 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 RESTQ13127 1097 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 TTC39AQ5SRH9 613 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
C11orf54-214ENST00000540113 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 EXOC5O00471 708 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
C11orf54-214ENST00000540113 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
C11orf54-214ENST00000540113 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
C11orf54-214ENST00000540113 NR1I2O75469 434 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 ZAP70P43403 619 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 SPC24Q8NBT2 197 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
C11orf54-214ENST00000540113 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.59□□□□□ -0.23
C11orf54-214ENST00000540113 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
C11orf54-214ENST00000540113 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
C11orf54-214ENST00000540113 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 DSCC1Q9BVC3 393 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 GREM2Q9H772 168 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
C11orf54-214ENST00000540113 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 PFKFB2O60825 505 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-214ENST00000540113 TNMDQ9H2S6 317 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 AKAP11Q9UKA4 1901 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 FOXP2O15409 715 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
C11orf54-214ENST00000540113 MYH7P12883 1935 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 ELP1O95163 1332 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 UBN2Q6ZU65 1347 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 CTSWP56202 376 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 TYRO3Q06418 890 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 SMARCC2Q8TAQ2 1214 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
C11orf54-214ENST00000540113 LRP5O75197 1615 aa13.57□□□□□ -0.24
C11orf54-214ENST00000540113 ITGA6P23229 1130 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
C11orf54-214ENST00000540113 OTUD7BQ6GQQ9 843 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 AKAP2Q9Y2D5 859 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 A0A087WWV3 80 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 PDIA3P30101 505 aaKnown RBP13.56□□□□□ -0.24
C11orf54-214ENST00000540113 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 RREB1Q92766 1687 aa13.56□□□□□ -0.24
C11orf54-214ENST00000540113 A0A0G2JS52 829 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms