RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 MAP3K2Q9Y2U5 619 aa19.24■□□□□ 0.67
USB1-203ENST00000539737 XDHP47989 1333 aa19.24■□□□□ 0.67
USB1-203ENST00000539737 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
USB1-203ENST00000539737 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
USB1-203ENST00000539737 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
USB1-203ENST00000539737 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
USB1-203ENST00000539737 CTSWP56202 376 aa19.22■□□□□ 0.67
USB1-203ENST00000539737 CALD1Q05682 793 aaKnown RBP19.22■□□□□ 0.67
USB1-203ENST00000539737 CWF19L2Q2TBE0 894 aaKnown RBP19.22■□□□□ 0.67
USB1-203ENST00000539737 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
USB1-203ENST00000539737 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
USB1-203ENST00000539737 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
USB1-203ENST00000539737 METTL22Q9BUU2 404 aaPredicted RBP19.22■□□□□ 0.67
USB1-203ENST00000539737 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
USB1-203ENST00000539737 CCER2I3L3R5 266 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 SNAP23O00161 211 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 ZNF609O15014 1411 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 ATP2B4P23634 1241 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 G2E3Q7L622 706 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
USB1-203ENST00000539737 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
USB1-203ENST00000539737 TTLL11Q8NHH1 800 aa19.2■□□□□ 0.66
USB1-203ENST00000539737 WNT10BO00744 389 aa19.19■□□□□ 0.66
USB1-203ENST00000539737 PTPN12Q05209 780 aaKnown RBP19.19■□□□□ 0.66
USB1-203ENST00000539737 KIAA0825Q8IV33 1275 aa19.19■□□□□ 0.66
USB1-203ENST00000539737 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
USB1-203ENST00000539737 HTTP42858 3142 aa19.19■□□□□ 0.66
USB1-203ENST00000539737 MYH3P11055 1940 aa19.19■□□□□ 0.66
USB1-203ENST00000539737 PI4KAP2A4QPH2 592 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 PI4KAP1Q8N8J0 262 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 AOX1Q06278 1338 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 MED23Q9ULK4 1368 aa19.18■□□□□ 0.66
USB1-203ENST00000539737 CCT4P50991 539 aaKnown RBP19.17■□□□□ 0.66
USB1-203ENST00000539737 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
USB1-203ENST00000539737 PODNQ7Z5L7 613 aa19.17■□□□□ 0.66
USB1-203ENST00000539737 JAG2Q9Y219 1238 aa19.17■□□□□ 0.66
USB1-203ENST00000539737 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
USB1-203ENST00000539737 GPR25O00155 361 aa19.16■□□□□ 0.66
USB1-203ENST00000539737 UBE3BQ7Z3V4 1068 aa19.16■□□□□ 0.66
USB1-203ENST00000539737 CENPFP49454 3210 aa19.16■□□□□ 0.66
USB1-203ENST00000539737 GNAI1P63096 354 aa19.15■□□□□ 0.66
USB1-203ENST00000539737 FKBP1BP68106 108 aa19.15■□□□□ 0.66
USB1-203ENST00000539737 CCDC27Q2M243 656 aa19.15■□□□□ 0.66
USB1-203ENST00000539737 CDC5LQ99459 802 aaKnown RBP19.15■□□□□ 0.66
USB1-203ENST00000539737 CHMP4AQ9BY43 222 aa19.15■□□□□ 0.66
USB1-203ENST00000539737 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
USB1-203ENST00000539737 GTF2IP78347 998 aa19.14■□□□□ 0.65
USB1-203ENST00000539737 KSR2Q6VAB6 950 aa19.14■□□□□ 0.65
USB1-203ENST00000539737 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.65
USB1-203ENST00000539737 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.65
USB1-203ENST00000539737 BRCA2P51587 3418 aa19.13■□□□□ 0.65
USB1-203ENST00000539737 NEURL1BA8MQ27 555 aa19.13■□□□□ 0.65
USB1-203ENST00000539737 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
USB1-203ENST00000539737 PRPF38BQ5VTL8 546 aaKnown RBP19.13■□□□□ 0.65
USB1-203ENST00000539737 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
USB1-203ENST00000539737 HELBQ8NG08 1087 aaPredicted RBP19.13■□□□□ 0.65
USB1-203ENST00000539737 ANGEL1Q9UNK9 670 aaKnown RBP19.13■□□□□ 0.65
USB1-203ENST00000539737 DDX58O95786 925 aaKnown RBP19.12■□□□□ 0.65
USB1-203ENST00000539737 TM4SF4P48230 202 aa19.12■□□□□ 0.65
USB1-203ENST00000539737 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
USB1-203ENST00000539737 ZNF804BA4D1E1 1349 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 CLRN2A0PK11 232 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 TAF5LO75529 589 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
USB1-203ENST00000539737 CAP1Q01518 475 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 STRIP1Q5VSL9 837 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 COA1Q9GZY4 146 aa19.11■□□□□ 0.65
USB1-203ENST00000539737 ITGA6P23229 1130 aa19.1■□□□□ 0.65
USB1-203ENST00000539737 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
USB1-203ENST00000539737 A0A1B0GUL6 1792 aa19.1■□□□□ 0.65
USB1-203ENST00000539737 POTEFA5A3E0 1075 aa19.09■□□□□ 0.65
USB1-203ENST00000539737 H7C1W4 665 aa19.09■□□□□ 0.65
USB1-203ENST00000539737 CHRNDQ07001 517 aa19.09■□□□□ 0.65
USB1-203ENST00000539737 SPRYD7Q5W111 196 aa19.09■□□□□ 0.65
USB1-203ENST00000539737 REM2Q8IYK8 340 aaPredicted RBP19.09■□□□□ 0.65
USB1-203ENST00000539737 IGF2BP3O00425 579 aaKnown RBP eCLIP19.08■□□□□ 0.64
USB1-203ENST00000539737 FKTNO75072 461 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 NF2P35240 595 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.64
USB1-203ENST00000539737 CASP7P55210 303 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 LDLRAD1Q5T700 205 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 FBXO46Q6PJ61 603 aaPredicted RBP19.08■□□□□ 0.64
USB1-203ENST00000539737 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
USB1-203ENST00000539737 IL16Q14005 1332 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 IRS2Q9Y4H2 1338 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 GJA5P36382 358 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 CDAN1Q8IWY9 1227 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 DEFB129Q9H1M3 183 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 CD209Q9NNX6 404 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
USB1-203ENST00000539737 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
USB1-203ENST00000539737 KCNJ4P48050 445 aa19.06■□□□□ 0.64
USB1-203ENST00000539737 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
USB1-203ENST00000539737 GCKRQ14397 625 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms