RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 USP17L4A6NCW7 530 aa21.63■■□□□ 1.05
SFSWAP-205ENST00000537164 TAF7LQ5H9L4 462 aa21.63■■□□□ 1.05
SFSWAP-205ENST00000537164 RSBN1LQ6PCB5 846 aaPredicted RBP21.63■■□□□ 1.05
SFSWAP-205ENST00000537164 USP17L1Q7RTZ2 530 aa21.63■■□□□ 1.05
SFSWAP-205ENST00000537164 TAF5LO75529 589 aa21.62■■□□□ 1.05
SFSWAP-205ENST00000537164 INTS3Q68E01 1043 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-205ENST00000537164 JMYQ8N9B5 988 aa21.62■■□□□ 1.05
SFSWAP-205ENST00000537164 TRPM4Q8TD43 1214 aa21.62■■□□□ 1.05
SFSWAP-205ENST00000537164 RIPOR2Q9Y4F9 1068 aa21.62■■□□□ 1.05
SFSWAP-205ENST00000537164 KLRK1P26718 216 aa21.61■■□□□ 1.05
SFSWAP-205ENST00000537164 ZNF280AP59817 542 aaPredicted RBP21.61■■□□□ 1.05
SFSWAP-205ENST00000537164 HELBQ8NG08 1087 aaPredicted RBP21.61■■□□□ 1.05
SFSWAP-205ENST00000537164 CNNM1Q9NRU3 951 aa21.61■■□□□ 1.05
SFSWAP-205ENST00000537164 TMEM88BA6NKF7 163 aa21.6■■□□□ 1.05
SFSWAP-205ENST00000537164 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
SFSWAP-205ENST00000537164 KCNJ4P48050 445 aa21.6■■□□□ 1.05
SFSWAP-205ENST00000537164 DACT2Q5SW24 774 aa21.6■■□□□ 1.05
SFSWAP-205ENST00000537164 STRIP1Q5VSL9 837 aa21.6■■□□□ 1.05
SFSWAP-205ENST00000537164 SNAP23O00161 211 aa21.59■■□□□ 1.05
SFSWAP-205ENST00000537164 BCAR3O75815 825 aa21.59■■□□□ 1.05
SFSWAP-205ENST00000537164 SAMD7Q7Z3H4 446 aa21.59■■□□□ 1.05
SFSWAP-205ENST00000537164 PUS3Q9BZE2 481 aaKnown RBP21.59■■□□□ 1.05
SFSWAP-205ENST00000537164 POLR2AP24928 1970 aaKnown RBP21.59■■□□□ 1.05
SFSWAP-205ENST00000537164 MROH5Q6ZUA9 1318 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 MYO3BQ8WXR4 1341 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 EGFRP00533 1210 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 TRIM27P14373 513 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 UBE4AQ14139 1066 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 CD209Q9NNX6 404 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 HDAC5Q9UQL6 1122 aa21.58■■□□□ 1.05
SFSWAP-205ENST00000537164 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
SFSWAP-205ENST00000537164 IL1R1P14778 569 aa21.57■■□□□ 1.04
SFSWAP-205ENST00000537164 RFX5P48382 616 aaPredicted RBP21.57■■□□□ 1.04
SFSWAP-205ENST00000537164 MMP14P50281 582 aa21.57■■□□□ 1.04
SFSWAP-205ENST00000537164 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
SFSWAP-205ENST00000537164 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-205ENST00000537164 KIF4BQ2VIQ3 1234 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 LRRC24Q50LG9 513 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 TTLL5Q6EMB2 1281 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 CDC37L1Q7L3B6 337 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 ZNF804AQ7Z570 1209 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 VGLL2Q8N8G2 317 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 CNTNAP1P78357 1384 aa21.55■■□□□ 1.04
SFSWAP-205ENST00000537164 TRAF5O00463 557 aa21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 PLIN1O60240 522 aa21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 PTPN12Q05209 780 aaKnown RBP21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 FMR1Q06787 632 aaKnown RBP eCLIP21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 CST9Q5W186 159 aa21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 MEIS3Q99687 375 aa21.54■■□□□ 1.04
SFSWAP-205ENST00000537164 RASSF10A6NK89 507 aa21.53■■□□□ 1.04
SFSWAP-205ENST00000537164 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
SFSWAP-205ENST00000537164 MYOZ2Q9NPC6 264 aa21.53■■□□□ 1.04
SFSWAP-205ENST00000537164 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
SFSWAP-205ENST00000537164 PDE8BO95263 885 aa21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 GNAI3P08754 354 aa21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 FKBP1AP62942 108 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 GTF2IP78347 998 aa21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 KLHDC4Q8TBB5 520 aa21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 MXD3Q9BW11 206 aa21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 LRRFIP2Q9Y608 721 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-205ENST00000537164 EYA2O00167 538 aa21.51■■□□□ 1.03
SFSWAP-205ENST00000537164 RBM26Q5T8P6 1007 aaKnown RBP21.51■■□□□ 1.03
SFSWAP-205ENST00000537164 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
SFSWAP-205ENST00000537164 FAM84BQ96KN1 310 aaPredicted RBP21.51■■□□□ 1.03
SFSWAP-205ENST00000537164 TNNQ9UQP3 1299 aa21.51■■□□□ 1.03
SFSWAP-205ENST00000537164 SASH1O94885 1247 aa21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 MTX1Q13505 466 aa21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 METTL24Q5JXM2 366 aa21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 OGFOD1Q8N543 542 aa21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 TDRD7Q8NHU6 1098 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 DCPSQ96C86 337 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 MKRN1Q9UHC7 482 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 PITPNM2Q9BZ72 1349 aa21.5■■□□□ 1.03
SFSWAP-205ENST00000537164 ARAP2Q8WZ64 1704 aa21.49■■□□□ 1.03
SFSWAP-205ENST00000537164 CIAO1O76071 339 aa21.49■■□□□ 1.03
SFSWAP-205ENST00000537164 ATG9AQ7Z3C6 839 aa21.49■■□□□ 1.03
SFSWAP-205ENST00000537164 KRT26Q7Z3Y9 468 aa21.49■■□□□ 1.03
SFSWAP-205ENST00000537164 FAM205AQ6ZU69 1335 aa21.49■■□□□ 1.03
SFSWAP-205ENST00000537164 FGFR2P21802 821 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 SCARF1Q14162 830 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 FBXO33Q7Z6M2 555 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 CERS5Q8N5B7 392 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 FBXW7Q969H0 707 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 GGA3Q9NZ52 723 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 TLL2Q9Y6L7 1015 aa21.48■■□□□ 1.03
SFSWAP-205ENST00000537164 CELF2O95319 508 aaKnown RBP21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 GYG1P46976 350 aa21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 ZBED3Q96IU2 234 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 COPRSQ9NQ92 184 aa21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 ECM29Q5VYK3 1845 aa21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 ASTN2O75129 1339 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-205ENST00000537164 WNT10BO00744 389 aa21.46■■□□□ 1.03
SFSWAP-205ENST00000537164 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
SFSWAP-205ENST00000537164 KIAA0825Q8IV33 1275 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms