RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CDCA5Q96FF9 252 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 XDHP47989 1333 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
PRKDC-207ENST00000536483 CTSWP56202 376 aa15.86■□□□□ 0.13
PRKDC-207ENST00000536483 ANGEL2Q5VTE6 544 aaKnown RBP15.86■□□□□ 0.13
PRKDC-207ENST00000536483 PLA2G12BQ9BX93 195 aa15.86■□□□□ 0.13
PRKDC-207ENST00000536483 USP17L8P0C7I0 530 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 RGS19P49795 217 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 CASP7P55210 303 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
PRKDC-207ENST00000536483 FKBP5Q13451 457 aaPredicted RBP15.85■□□□□ 0.13
PRKDC-207ENST00000536483 GCKRQ14397 625 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 GMLQ99445 158 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
PRKDC-207ENST00000536483 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
PRKDC-207ENST00000536483 USP17L3A6NCW0 530 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 USP17L4A6NCW7 530 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 SLC10A3P09131 477 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 USP17L1Q7RTZ2 530 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 TTLL11Q8NHH1 800 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 GREM2Q9H772 168 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 MINPP1Q9UNW1 487 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 ZNF609O15014 1411 aa15.84■□□□□ 0.13
PRKDC-207ENST00000536483 TRPA1O75762 1119 aa15.83■□□□□ 0.12
PRKDC-207ENST00000536483 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
PRKDC-207ENST00000536483 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
PRKDC-207ENST00000536483 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
PRKDC-207ENST00000536483 BSDC1Q9NW68 430 aaPredicted RBP15.83■□□□□ 0.12
PRKDC-207ENST00000536483 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
PRKDC-207ENST00000536483 SAGE1Q9NXZ1 904 aa15.83■□□□□ 0.12
PRKDC-207ENST00000536483 SCAF8Q9UPN6 1271 aaKnown RBP15.83■□□□□ 0.12
PRKDC-207ENST00000536483 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
PRKDC-207ENST00000536483 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
PRKDC-207ENST00000536483 MXD3Q9BW11 206 aa15.82■□□□□ 0.12
PRKDC-207ENST00000536483 CSF1RP07333 972 aa15.81■□□□□ 0.12
PRKDC-207ENST00000536483 CCT4P50991 539 aaKnown RBP15.81■□□□□ 0.12
PRKDC-207ENST00000536483 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
PRKDC-207ENST00000536483 MRPL50Q8N5N7 158 aaKnown RBP15.81■□□□□ 0.12
PRKDC-207ENST00000536483 MED23Q9ULK4 1368 aa15.81■□□□□ 0.12
PRKDC-207ENST00000536483 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 FKBP1BP68106 108 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 NBPF9Q3BBW0 867 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 ALDH1L2Q3SY69 923 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 PRAMEF18Q5VWM3 479 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 UBE3BQ7Z3V4 1068 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 PSME4Q14997 1843 aa15.8■□□□□ 0.12
PRKDC-207ENST00000536483 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
PRKDC-207ENST00000536483 DACT2Q5SW24 774 aa15.79■□□□□ 0.12
PRKDC-207ENST00000536483 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
PRKDC-207ENST00000536483 MIER1Q8N108 512 aa15.79■□□□□ 0.12
PRKDC-207ENST00000536483 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
PRKDC-207ENST00000536483 PTPRCP08575 1304 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 F6X3S4 739 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
PRKDC-207ENST00000536483 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 COA1Q9GZY4 146 aa15.78■□□□□ 0.12
PRKDC-207ENST00000536483 WNT10BO00744 389 aa15.77■□□□□ 0.12
PRKDC-207ENST00000536483 ITGA6P23229 1130 aa15.77■□□□□ 0.12
PRKDC-207ENST00000536483 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-207ENST00000536483 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
PRKDC-207ENST00000536483 LEMD3Q9Y2U8 911 aa15.77■□□□□ 0.12
PRKDC-207ENST00000536483 AKAP11Q9UKA4 1901 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 ZNF804BA4D1E1 1349 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 UTYO14607 1347 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 MYO3BQ8WXR4 1341 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 KLRK1P26718 216 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 TTLL12Q14166 644 aaPredicted RBP15.76■□□□□ 0.11
PRKDC-207ENST00000536483 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 PAPPA2Q9BXP8 1791 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 MYH3P11055 1940 aa15.76■□□□□ 0.11
PRKDC-207ENST00000536483 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 GRM8O00222 908 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 SASH1O94885 1247 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 FOXO4P98177 505 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 MPHOSPH8Q99549 860 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 SRCIN1Q9C0H9 1055 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 ANKRD2Q9GZV1 360 aa15.75■□□□□ 0.11
PRKDC-207ENST00000536483 KIAA0825Q8IV33 1275 aa15.74■□□□□ 0.11
PRKDC-207ENST00000536483 NF2P35240 595 aa15.73■□□□□ 0.11
PRKDC-207ENST00000536483 KCNJ4P48050 445 aa15.73■□□□□ 0.11
PRKDC-207ENST00000536483 SOX10P56693 466 aa15.73■□□□□ 0.11
PRKDC-207ENST00000536483 GTF2IP78347 998 aa15.73■□□□□ 0.11
PRKDC-207ENST00000536483 CHRNDQ07001 517 aa15.73■□□□□ 0.11
PRKDC-207ENST00000536483 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
PRKDC-207ENST00000536483 CTU1Q7Z7A3 348 aaKnown RBP15.73■□□□□ 0.11
PRKDC-207ENST00000536483 SNAP23O00161 211 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 SLC34A2O95436 690 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 TBC1D8O95759 1140 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 MMP14P50281 582 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 PRKG1Q13976 671 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 HDAC9Q9UKV0 1011 aa15.72■□□□□ 0.11
PRKDC-207ENST00000536483 ZNF646O15015 1829 aaPredicted RBP15.72■□□□□ 0.11
PRKDC-207ENST00000536483 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
PRKDC-207ENST00000536483 KAZALD1Q96I82 304 aa15.71■□□□□ 0.11
PRKDC-207ENST00000536483 CD209Q9NNX6 404 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms