RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PDE3BQ13370 1112 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 TMEM130Q8N3G9 435 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 KLHL23Q8NBE8 558 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 WNT8BQ93098 351 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 ADAM19Q9H013 955 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
ITGB1-219ENST00000534049 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 TXNDC2Q86VQ3 553 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 CHRDQ9H2X0 955 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 ANO2Q9NQ90 1003 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 AMOTL2Q9Y2J4 779 aa7.37□□□□□ -1.23
ITGB1-219ENST00000534049 PDE2AO00408 941 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-219ENST00000534049 BRD1O95696 1058 aa7.36□□□□□ -1.23
ITGB1-219ENST00000534049 SERPINB4P48594 390 aa7.36□□□□□ -1.23
ITGB1-219ENST00000534049 TMEM102Q8N9M5 508 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-219ENST00000534049 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
ITGB1-219ENST00000534049 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
ITGB1-219ENST00000534049 DZANK1Q9NVP4 752 aa7.36□□□□□ -1.23
ITGB1-219ENST00000534049 A6NHS1 94 aa7.35□□□□□ -1.23
ITGB1-219ENST00000534049 H3BRJ5 948 aa7.35□□□□□ -1.23
ITGB1-219ENST00000534049 PIP4K2BP78356 416 aa7.35□□□□□ -1.23
ITGB1-219ENST00000534049 RSPO4Q2I0M5 234 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-219ENST00000534049 NKAPLQ5M9Q1 402 aa7.35□□□□□ -1.23
ITGB1-219ENST00000534049 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
ITGB1-219ENST00000534049 CCDC87Q9NVE4 849 aa7.35□□□□□ -1.23
ITGB1-219ENST00000534049 LINC01387J3KSC0 135 aa7.34□□□□□ -1.23
ITGB1-219ENST00000534049 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-219ENST00000534049 SEMA6BQ9H3T3 888 aa7.34□□□□□ -1.23
ITGB1-219ENST00000534049 OSGEPQ9NPF4 335 aa7.34□□□□□ -1.23
ITGB1-219ENST00000534049 SEC31BQ9NQW1 1179 aa7.34□□□□□ -1.23
ITGB1-219ENST00000534049 GNEQ9Y223 722 aaKnown RBP7.34□□□□□ -1.23
ITGB1-219ENST00000534049 FSCN2O14926 492 aa7.33□□□□□ -1.24
ITGB1-219ENST00000534049 EREGO14944 169 aa7.33□□□□□ -1.24
ITGB1-219ENST00000534049 IREB2P48200 963 aaKnown RBP7.33□□□□□ -1.24
ITGB1-219ENST00000534049 ARL4DP49703 201 aa7.33□□□□□ -1.24
ITGB1-219ENST00000534049 OSMRQ99650 979 aa7.33□□□□□ -1.24
ITGB1-219ENST00000534049 SSBP4Q9BWG4 385 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-219ENST00000534049 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
ITGB1-219ENST00000534049 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-219ENST00000534049 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-219ENST00000534049 NFKBIEO00221 500 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 DYRK3O43781 588 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 EPHA1P21709 976 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 NOS3P29474 1203 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 ARHGAP4P98171 946 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 BSNDQ8WZ55 320 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 TP53INP1Q96A56 240 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 CEP41Q9BYV8 373 aa7.32□□□□□ -1.24
ITGB1-219ENST00000534049 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-219ENST00000534049 FOXD3Q9UJU5 478 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-219ENST00000534049 Q6ZS46 218 aa7.31□□□□□ -1.24
ITGB1-219ENST00000534049 NXPE3Q969Y0 559 aa7.31□□□□□ -1.24
ITGB1-219ENST00000534049 DMRTB1Q96MA1 342 aa7.31□□□□□ -1.24
ITGB1-219ENST00000534049 ZKSCAN3Q9BRR0 538 aa7.31□□□□□ -1.24
ITGB1-219ENST00000534049 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
ITGB1-219ENST00000534049 ECM1Q16610 540 aa7.3□□□□□ -1.24
ITGB1-219ENST00000534049 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.3□□□□□ -1.24
ITGB1-219ENST00000534049 SLC51AQ86UW1 340 aa7.3□□□□□ -1.24
ITGB1-219ENST00000534049 GALNT12Q8IXK2 581 aa7.3□□□□□ -1.24
ITGB1-219ENST00000534049 DZIP1LQ8IYY4 767 aaKnown RBP7.3□□□□□ -1.24
ITGB1-219ENST00000534049 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
ITGB1-219ENST00000534049 DNAJC25Q9H1X3 360 aa7.3□□□□□ -1.24
ITGB1-219ENST00000534049 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-219ENST00000534049 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
ITGB1-219ENST00000534049 DUOXA2Q1HG44 320 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 UVSSAQ2YD98 709 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 TXNDC11Q6PKC3 985 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
ITGB1-219ENST00000534049 SOX17Q9H6I2 414 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-219ENST00000534049 CPNE3O75131 537 aaKnown RBP7.28□□□□□ -1.24
ITGB1-219ENST00000534049 ACPPP15309 386 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 IKBKEQ14164 716 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-219ENST00000534049 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-219ENST00000534049 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 TMC1Q8TDI8 760 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
ITGB1-219ENST00000534049 GLB1P16278 677 aa7.27□□□□□ -1.25
ITGB1-219ENST00000534049 CDC25BP30305 580 aa7.27□□□□□ -1.25
ITGB1-219ENST00000534049 PEAR1Q5VY43 1037 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-219ENST00000534049 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
ITGB1-219ENST00000534049 CARD10Q9BWT7 1032 aa7.27□□□□□ -1.25
ITGB1-219ENST00000534049 KCNA1Q09470 495 aa7.26□□□□□ -1.25
ITGB1-219ENST00000534049 KIAA0319Q5VV43 1072 aa7.26□□□□□ -1.25
ITGB1-219ENST00000534049 ANKRD34AQ69YU3 496 aa7.26□□□□□ -1.25
ITGB1-219ENST00000534049 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
ITGB1-219ENST00000534049 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
ITGB1-219ENST00000534049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-219ENST00000534049 TM4SF5O14894 197 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 GSC2O15499 205 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms