RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
CAPN1-227ENST00000533909 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
CAPN1-227ENST00000533909 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
CAPN1-227ENST00000533909 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-227ENST00000533909 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 KLRK1P26718 216 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 APLP1P51693 650 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 MICALL2Q8IY33 904 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 DPF2Q92785 391 aa16.68■□□□□ 0.26
CAPN1-227ENST00000533909 SNAP23O00161 211 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 VIL1P09327 827 aaKnown RBP16.67■□□□□ 0.26
CAPN1-227ENST00000533909 UBE4AQ14139 1066 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-227ENST00000533909 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 SIL1Q9H173 461 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
CAPN1-227ENST00000533909 EYA2O00167 538 aa16.66■□□□□ 0.26
CAPN1-227ENST00000533909 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
CAPN1-227ENST00000533909 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-227ENST00000533909 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-227ENST00000533909 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
CAPN1-227ENST00000533909 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
CAPN1-227ENST00000533909 PDE8BO95263 885 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-227ENST00000533909 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
CAPN1-227ENST00000533909 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
CAPN1-227ENST00000533909 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
CAPN1-227ENST00000533909 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 OGFOD1Q8N543 542 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 PANK1Q8TE04 598 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 MYO3BQ8WXR4 1341 aa16.64■□□□□ 0.25
CAPN1-227ENST00000533909 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-227ENST00000533909 CIAO1O76071 339 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
CAPN1-227ENST00000533909 USP17L8P0C7I0 530 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 RLBP1P12271 317 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
CAPN1-227ENST00000533909 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-227ENST00000533909 GTF2IP78347 998 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-227ENST00000533909 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 CEP126Q9P2H0 1117 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
CAPN1-227ENST00000533909 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
CAPN1-227ENST00000533909 SLC5A1P13866 664 aa16.62■□□□□ 0.25
CAPN1-227ENST00000533909 GYG1P46976 350 aa16.62■□□□□ 0.25
CAPN1-227ENST00000533909 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
CAPN1-227ENST00000533909 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
CAPN1-227ENST00000533909 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
CAPN1-227ENST00000533909 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 MTX1Q13505 466 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 TRPM4Q8TD43 1214 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
CAPN1-227ENST00000533909 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
CAPN1-227ENST00000533909 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
CAPN1-227ENST00000533909 IL1R1P14778 569 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-227ENST00000533909 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 LPIN2Q92539 896 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-227ENST00000533909 MXD3Q9BW11 206 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
CAPN1-227ENST00000533909 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
CAPN1-227ENST00000533909 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
CAPN1-227ENST00000533909 MYOZ2Q9NPC6 264 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 JAG2Q9Y219 1238 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 ZNF609O15014 1411 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 PSME4Q14997 1843 aa16.59■□□□□ 0.25
CAPN1-227ENST00000533909 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-227ENST00000533909 SASH1O94885 1247 aa16.58■□□□□ 0.24
CAPN1-227ENST00000533909 HIRAP54198 1017 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-227ENST00000533909 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-227ENST00000533909 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
CAPN1-227ENST00000533909 GMLQ99445 158 aa16.58■□□□□ 0.24
CAPN1-227ENST00000533909 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
CAPN1-227ENST00000533909 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
CAPN1-227ENST00000533909 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.24
CAPN1-227ENST00000533909 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
CAPN1-227ENST00000533909 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-227ENST00000533909 MMP14P50281 582 aa16.57■□□□□ 0.24
CAPN1-227ENST00000533909 HTRA3P83110 453 aa16.57■□□□□ 0.24
CAPN1-227ENST00000533909 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-227ENST00000533909 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
CAPN1-227ENST00000533909 IQSEC3Q9UPP2 1182 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-227ENST00000533909 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
CAPN1-227ENST00000533909 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms