RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 STOX1Q6ZVD7 989 aa33.89■■■■□ 3.02
SAMD1-202ENST00000533683 PUM3Q15397 648 aaKnown RBP33.89■■■■□ 3.02
SAMD1-202ENST00000533683 CLEC4GQ6UXB4 293 aa33.89■■■■□ 3.02
SAMD1-202ENST00000533683 BRPF3Q9ULD4 1205 aa33.89■■■■□ 3.02
SAMD1-202ENST00000533683 DTNBO60941 627 aa33.88■■■■□ 3.01
SAMD1-202ENST00000533683 FGFR2P21802 821 aa33.88■■■■□ 3.01
SAMD1-202ENST00000533683 CCDC152Q4G0S7 254 aa33.88■■■■□ 3.01
SAMD1-202ENST00000533683 ZSCAN22P10073 491 aaPredicted RBP33.88■■■■□ 3.01
SAMD1-202ENST00000533683 LPIN2Q92539 896 aa33.88■■■■□ 3.01
SAMD1-202ENST00000533683 HSP90B1P14625 803 aaKnown RBP33.87■■■■□ 3.01
SAMD1-202ENST00000533683 WASHC4Q2M389 1173 aa33.87■■■■□ 3.01
SAMD1-202ENST00000533683 MPHOSPH8Q99549 860 aa33.87■■■■□ 3.01
SAMD1-202ENST00000533683 CCDC102BQ68D86 513 aa33.87■■■■□ 3.01
SAMD1-202ENST00000533683 GPT2Q8TD30 523 aa33.87■■■■□ 3.01
SAMD1-202ENST00000533683 XRCC6P12956 609 aaKnown RBP eCLIP33.86■■■■□ 3.01
SAMD1-202ENST00000533683 NCLP19338 710 aaKnown RBP33.86■■■■□ 3.01
SAMD1-202ENST00000533683 PHKA1P46020 1223 aa33.86■■■■□ 3.01
SAMD1-202ENST00000533683 LAMB2P55268 1798 aa33.86■■■■□ 3.01
SAMD1-202ENST00000533683 MYH7P12883 1935 aa33.86■■■■□ 3.01
SAMD1-202ENST00000533683 CNTNAP4Q9C0A0 1308 aa33.86■■■■□ 3.01
SAMD1-202ENST00000533683 RTL9Q8NET4 1388 aa33.85■■■■□ 3.01
SAMD1-202ENST00000533683 FOXD4L6Q3SYB3 417 aaPredicted RBP33.85■■■■□ 3.01
SAMD1-202ENST00000533683 FOXD4L3Q6VB84 417 aaPredicted RBP33.85■■■■□ 3.01
SAMD1-202ENST00000533683 APPBP2Q92624 585 aa33.85■■■■□ 3.01
SAMD1-202ENST00000533683 ISY1Q9ULR0 285 aaKnown RBP33.85■■■■□ 3.01
SAMD1-202ENST00000533683 A0A0G2JLW4 131 aa33.85■■■■□ 3.01
SAMD1-202ENST00000533683 THSD7AQ9UPZ6 1657 aa33.85■■■■□ 3.01
SAMD1-202ENST00000533683 ARID4AP29374 1257 aaPredicted RBP33.84■■■■□ 3.01
SAMD1-202ENST00000533683 LAMA4Q16363 1823 aa33.84■■■■□ 3.01
SAMD1-202ENST00000533683 Q6ZUG5 572 aa33.84■■■■□ 3.01
SAMD1-202ENST00000533683 GAS2L3Q86XJ1 694 aa33.84■■■■□ 3.01
SAMD1-202ENST00000533683 PUS7LQ9H0K6 701 aaKnown RBP33.83■■■■□ 3.01
SAMD1-202ENST00000533683 ARAP2Q8WZ64 1704 aa33.83■■■■□ 3.01
SAMD1-202ENST00000533683 FOXP2O15409 715 aa33.82■■■■□ 3.01
SAMD1-202ENST00000533683 HMGB1P09429 215 aaKnown RBP33.82■■■■□ 3.01
SAMD1-202ENST00000533683 CAVIN1Q6NZI2 390 aaKnown RBP33.82■■■■□ 3.01
SAMD1-202ENST00000533683 BTAF1O14981 1849 aa33.82■■■■□ 3
SAMD1-202ENST00000533683 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.82■■■■□ 3
SAMD1-202ENST00000533683 UQCRFS1P1P0C7P4 283 aa33.81■■■■□ 3
SAMD1-202ENST00000533683 TTF1Q15361 905 aaPredicted RBP33.81■■■■□ 3
SAMD1-202ENST00000533683 FAM182BQ5T319 152 aa33.81■■■■□ 3
SAMD1-202ENST00000533683 SNAP23O00161 211 aa33.81■■■■□ 3
SAMD1-202ENST00000533683 MRE11P49959 708 aa33.81■■■■□ 3
SAMD1-202ENST00000533683 TTLL5Q6EMB2 1281 aa33.81■■■■□ 3
SAMD1-202ENST00000533683 E7EWF7 191 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 F13A1P00488 732 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 SLC5A1P13866 664 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 IGHMBP2P38935 993 aaKnown RBP33.8■■■■□ 3
SAMD1-202ENST00000533683 SMIM5Q71RC9 77 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 DHX32Q7L7V1 743 aaKnown RBP33.8■■■■□ 3
SAMD1-202ENST00000533683 PIH1D3Q9NQM4 214 aaKnown RBP33.8■■■■□ 3
SAMD1-202ENST00000533683 MTMR6Q9Y217 621 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 TCHHQ07283 1943 aa33.8■■■■□ 3
SAMD1-202ENST00000533683 STK3Q13188 491 aa33.79■■■■□ 3
SAMD1-202ENST00000533683 ADD2P35612 726 aa33.79■■■■□ 3
SAMD1-202ENST00000533683 LRRC2Q9BYS8 371 aa33.79■■■■□ 3
SAMD1-202ENST00000533683 GRPEL1Q9HAV7 217 aa33.79■■■■□ 3
SAMD1-202ENST00000533683 ZSCAN25Q6NSZ9 544 aa33.78■■■■□ 3
SAMD1-202ENST00000533683 NSFL1CQ9UNZ2 370 aaKnown RBP33.78■■■■□ 3
SAMD1-202ENST00000533683 MYO5AQ9Y4I1 1855 aaKnown RBP33.78■■■■□ 3
SAMD1-202ENST00000533683 ERFEQ4G0M1 354 aa33.78■■■■□ 3
SAMD1-202ENST00000533683 SLC9C2Q5TAH2 1124 aa33.78■■■■□ 3
SAMD1-202ENST00000533683 RC3H1Q5TC82 1133 aaKnown RBP33.78■■■■□ 3
SAMD1-202ENST00000533683 NHSQ6T4R5 1651 aa33.77■■■■□ 3
SAMD1-202ENST00000533683 EXOSC10Q01780 885 aaKnown RBP33.77■■■■□ 3
SAMD1-202ENST00000533683 GDPD2Q9HCC8 539 aa33.77■■■■□ 3
SAMD1-202ENST00000533683 CTNNA3Q9UI47 895 aa33.77■■■■□ 3
SAMD1-202ENST00000533683 BRF1Q92994 677 aa33.77■■■■□ 3
SAMD1-202ENST00000533683 GPAA1O43292 621 aa33.76■■■□□ 2.99
SAMD1-202ENST00000533683 GTF3C6Q969F1 213 aa33.76■■■□□ 2.99
SAMD1-202ENST00000533683 BCL2L12Q9HB09 334 aa33.76■■■□□ 2.99
SAMD1-202ENST00000533683 RGL2O15211 777 aa33.75■■■□□ 2.99
SAMD1-202ENST00000533683 FGAP02671 866 aa33.75■■■□□ 2.99
SAMD1-202ENST00000533683 ZSCAN23Q3MJ62 389 aa33.75■■■□□ 2.99
SAMD1-202ENST00000533683 RPS6KA4O75676 772 aa33.75■■■□□ 2.99
SAMD1-202ENST00000533683 IDH1O75874 414 aaKnown RBP33.75■■■□□ 2.99
SAMD1-202ENST00000533683 MBD3O95983 291 aa33.75■■■□□ 2.99
SAMD1-202ENST00000533683 LARP1BQ659C4 914 aaKnown RBP33.75■■■□□ 2.99
SAMD1-202ENST00000533683 SCN7AQ01118 1682 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 FGD1P98174 961 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 TBC1D9BQ66K14 1250 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 BICDL1Q6ZP65 573 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 C3orf67Q6ZVT6 689 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 USP48Q86UV5 1035 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 GJD4Q96KN9 370 aaPredicted RBP33.74■■■□□ 2.99
SAMD1-202ENST00000533683 RBM27Q9P2N5 1060 aaKnown RBP33.74■■■□□ 2.99
SAMD1-202ENST00000533683 ATP6V1DQ9Y5K8 247 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 COL4A1P02462 1669 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 SPATA5Q8NB90 893 aa33.74■■■□□ 2.99
SAMD1-202ENST00000533683 ZNF445P59923 1031 aa33.73■■■□□ 2.99
SAMD1-202ENST00000533683 UBE3CQ15386 1083 aa33.73■■■□□ 2.99
SAMD1-202ENST00000533683 AGXT2Q9BYV1 514 aa33.73■■■□□ 2.99
SAMD1-202ENST00000533683 PANK2Q9BZ23 570 aa33.73■■■□□ 2.99
SAMD1-202ENST00000533683 ATRNO75882 1429 aa33.73■■■□□ 2.99
SAMD1-202ENST00000533683 VPS37CA5D8V6 355 aaPredicted RBP33.72■■■□□ 2.99
SAMD1-202ENST00000533683 CHRNDQ07001 517 aa33.72■■■□□ 2.99
SAMD1-202ENST00000533683 RASGRF1Q13972 1273 aa33.72■■■□□ 2.99
SAMD1-202ENST00000533683 MEX3CQ5U5Q3 659 aaKnown RBP33.72■■■□□ 2.99
SAMD1-202ENST00000533683 CDC5LQ99459 802 aaKnown RBP33.72■■■□□ 2.99
SAMD1-202ENST00000533683 NARFQ9UHQ1 456 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms