RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 SNAP23O00161 211 aa27.62■■■□□ 2.01
NDUFS3-210ENST00000533105 PLIN1O60240 522 aa27.62■■■□□ 2.01
NDUFS3-210ENST00000533105 EGFRP00533 1210 aa27.62■■■□□ 2.01
NDUFS3-210ENST00000533105 PGAP2Q9UHJ9 254 aa27.62■■■□□ 2.01
NDUFS3-210ENST00000533105 AGBL3Q8NEM8 1001 aa27.61■■■□□ 2.01
NDUFS3-210ENST00000533105 USP44Q9H0E7 712 aa27.61■■■□□ 2.01
NDUFS3-210ENST00000533105 ABT1Q9ULW3 272 aaKnown RBP27.61■■■□□ 2.01
NDUFS3-210ENST00000533105 RARSP54136 660 aaKnown RBP27.6■■■□□ 2.01
NDUFS3-210ENST00000533105 CNTNAP1P78357 1384 aa27.6■■■□□ 2.01
NDUFS3-210ENST00000533105 KIF4BQ2VIQ3 1234 aa27.59■■■□□ 2.01
NDUFS3-210ENST00000533105 CDC37L1Q7L3B6 337 aa27.58■■■□□ 2.01
NDUFS3-210ENST00000533105 ANKRD44Q8N8A2 993 aa27.58■■■□□ 2.01
NDUFS3-210ENST00000533105 MXD3Q9BW11 206 aa27.58■■■□□ 2.01
NDUFS3-210ENST00000533105 API5Q9BZZ5 524 aaKnown RBP27.58■■■□□ 2.01
NDUFS3-210ENST00000533105 USP17L8P0C7I0 530 aa27.57■■■□□ 2
NDUFS3-210ENST00000533105 RABL6Q3YEC7 729 aaPredicted RBP27.57■■■□□ 2
NDUFS3-210ENST00000533105 CST9Q5W186 159 aa27.57■■■□□ 2
NDUFS3-210ENST00000533105 USP48Q86UV5 1035 aa27.57■■■□□ 2
NDUFS3-210ENST00000533105 BRPF1P55201 1214 aaPredicted RBP27.56■■■□□ 2
NDUFS3-210ENST00000533105 DACT2Q5SW24 774 aa27.56■■■□□ 2
NDUFS3-210ENST00000533105 STRIP1Q5VSL9 837 aa27.56■■■□□ 2
NDUFS3-210ENST00000533105 GMLQ99445 158 aa27.56■■■□□ 2
NDUFS3-210ENST00000533105 PUS3Q9BZE2 481 aaKnown RBP27.56■■■□□ 2
NDUFS3-210ENST00000533105 ZNF408Q9H9D4 720 aa27.56■■■□□ 2
NDUFS3-210ENST00000533105 CELF2O95319 508 aaKnown RBP27.55■■■□□ 2
NDUFS3-210ENST00000533105 ZNF280AP59817 542 aaPredicted RBP27.55■■■□□ 2
NDUFS3-210ENST00000533105 DEFB115Q30KQ5 88 aa27.55■■■□□ 2
NDUFS3-210ENST00000533105 DCPSQ96C86 337 aaKnown RBP27.55■■■□□ 2
NDUFS3-210ENST00000533105 CD209Q9NNX6 404 aa27.55■■■□□ 2
NDUFS3-210ENST00000533105 ZNF609O15014 1411 aa27.54■■■□□ 2
NDUFS3-210ENST00000533105 VEGFBP49765 207 aa27.54■■■□□ 2
NDUFS3-210ENST00000533105 TTLL5Q6EMB2 1281 aa27.54■■■□□ 2
NDUFS3-210ENST00000533105 KIF16BQ96L93 1317 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 IRS2Q9Y4H2 1338 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 RASSF10A6NK89 507 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 GTF2IP78347 998 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 C15orf52Q6ZUT6 534 aaKnown RBP27.53■■■□□ 2
NDUFS3-210ENST00000533105 KRT26Q7Z3Y9 468 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 MYOZ2Q9NPC6 264 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 PSME4Q14997 1843 aa27.53■■■□□ 2
NDUFS3-210ENST00000533105 DLK2Q6UY11 383 aa27.52■■■□□ 2
NDUFS3-210ENST00000533105 PAXIP1Q6ZW49 1069 aaPredicted RBP27.52■■■□□ 2
NDUFS3-210ENST00000533105 ZNF804AQ7Z570 1209 aa27.52■■■□□ 2
NDUFS3-210ENST00000533105 GGA3Q9NZ52 723 aa27.52■■■□□ 2
NDUFS3-210ENST00000533105 ASTN2O75129 1339 aaPredicted RBP27.51■■□□□ 1.99
NDUFS3-210ENST00000533105 MYO3BQ8WXR4 1341 aa27.51■■□□□ 1.99
NDUFS3-210ENST00000533105 UBTFL1P0CB47 393 aaPredicted RBP27.51■■□□□ 1.99
NDUFS3-210ENST00000533105 SCARF1Q14162 830 aa27.51■■□□□ 1.99
NDUFS3-210ENST00000533105 OGFOD1Q8N543 542 aa27.51■■□□□ 1.99
NDUFS3-210ENST00000533105 MROH5Q6ZUA9 1318 aa27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 ADM5C9JUS6 153 aa27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 HSPA1AP0DMV8 641 aaKnown RBP27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 HSPA1BP0DMV9 641 aaKnown RBP27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 LRRC24Q50LG9 513 aa27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 KLHDC4Q8TBB5 520 aa27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 RIPOR2Q9Y4F9 1068 aa27.5■■□□□ 1.99
NDUFS3-210ENST00000533105 ARHGAP45Q92619 1136 aa27.49■■□□□ 1.99
NDUFS3-210ENST00000533105 TLL2Q9Y6L7 1015 aa27.49■■□□□ 1.99
NDUFS3-210ENST00000533105 A0A1B0GUL6 1792 aa27.49■■□□□ 1.99
NDUFS3-210ENST00000533105 PCNTO95613 3336 aa27.49■■□□□ 1.99
NDUFS3-210ENST00000533105 BCAR3O75815 825 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 GRM1Q13255 1194 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 UBE4AQ14139 1066 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 METTL24Q5JXM2 366 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 ANGEL2Q5VTE6 544 aaKnown RBP27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 KIAA0825Q8IV33 1275 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 SULF1Q8IWU6 871 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 FRAT1Q92837 279 aaPredicted RBP27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 TRPM7Q96QT4 1865 aa27.48■■□□□ 1.99
NDUFS3-210ENST00000533105 WDR33Q9C0J8 1336 aaKnown RBP27.46■■□□□ 1.99
NDUFS3-210ENST00000533105 IPO8O15397 1037 aaKnown RBP27.46■■□□□ 1.99
NDUFS3-210ENST00000533105 IL1R1P14778 569 aa27.46■■□□□ 1.99
NDUFS3-210ENST00000533105 JAG2Q9Y219 1238 aa27.46■■□□□ 1.99
NDUFS3-210ENST00000533105 GYG1P46976 350 aa27.45■■□□□ 1.98
NDUFS3-210ENST00000533105 CYP4F22Q6NT55 531 aa27.45■■□□□ 1.98
NDUFS3-210ENST00000533105 SAPCD2Q86UD0 394 aa27.45■■□□□ 1.98
NDUFS3-210ENST00000533105 HDAC9Q9UKV0 1011 aa27.45■■□□□ 1.98
NDUFS3-210ENST00000533105 NBPF9Q3BBW0 867 aa27.44■■□□□ 1.98
NDUFS3-210ENST00000533105 CAPNS2Q96L46 248 aa27.44■■□□□ 1.98
NDUFS3-210ENST00000533105 LRRFIP2Q9Y608 721 aaKnown RBP27.44■■□□□ 1.98
NDUFS3-210ENST00000533105 HIBADHP31937 336 aaKnown RBP27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 ECE1P42892 770 aa27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 INTS3Q68E01 1043 aaKnown RBP27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 MEIS3Q99687 375 aa27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 HDAC5Q9UQL6 1122 aa27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 ZNF646O15015 1829 aaPredicted RBP27.43■■□□□ 1.98
NDUFS3-210ENST00000533105 TRIM27P14373 513 aa27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 RFX5P48382 616 aaPredicted RBP27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 CERS5Q8N5B7 392 aa27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 FAM84BQ96KN1 310 aaPredicted RBP27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 SCAF8Q9UPN6 1271 aaKnown RBP27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 TNNQ9UQP3 1299 aa27.42■■□□□ 1.98
NDUFS3-210ENST00000533105 POLR2AP24928 1970 aaKnown RBP27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 F8W031 263 aaPredicted RBP27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 WNT10BO00744 389 aa27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 SASH1O94885 1247 aa27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 PDE8BO95263 885 aa27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 ATF7IPQ6VMQ6 1270 aa27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 CLUAP1Q96AJ1 413 aa27.41■■□□□ 1.98
NDUFS3-210ENST00000533105 ZBED9Q6R2W3 1325 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms