RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 KAZALD1Q96I82 304 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 MPHOSPH8Q99549 860 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 MXD3Q9BW11 206 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 LEMD3Q9Y2U8 911 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 ZNF804BA4D1E1 1349 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 FOXN1O15353 648 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 CYP4F22Q6NT55 531 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 TRMT2AQ8IZ69 625 aaKnown RBP24.03■■□□□ 1.44
SSH3-209ENST00000532600 SRCIN1Q9C0H9 1055 aa24.03■■□□□ 1.44
SSH3-209ENST00000532600 DACT2Q5SW24 774 aa24.02■■□□□ 1.44
SSH3-209ENST00000532600 SAPCD2Q86UD0 394 aa24.02■■□□□ 1.44
SSH3-209ENST00000532600 ZNF594Q96JF6 807 aaPredicted RBP24.02■■□□□ 1.44
SSH3-209ENST00000532600 ANKRD2Q9GZV1 360 aa24.02■■□□□ 1.44
SSH3-209ENST00000532600 WBP1LQ9NX94 342 aa24.02■■□□□ 1.44
SSH3-209ENST00000532600 ADM5C9JUS6 153 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 TAF5LO75529 589 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 NBPF7P0C2Y1 421 aaPredicted RBP24.01■■□□□ 1.43
SSH3-209ENST00000532600 IFIT5Q13325 482 aaKnown RBP24.01■■□□□ 1.43
SSH3-209ENST00000532600 HELBQ8NG08 1087 aaPredicted RBP24.01■■□□□ 1.43
SSH3-209ENST00000532600 SUCLG2Q96I99 432 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 CAPNS2Q96L46 248 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 COA1Q9GZY4 146 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 CHMP3Q9Y3E7 222 aa24.01■■□□□ 1.43
SSH3-209ENST00000532600 KRT26Q7Z3Y9 468 aa24■■□□□ 1.43
SSH3-209ENST00000532600 ZNF408Q9H9D4 720 aa24■■□□□ 1.43
SSH3-209ENST00000532600 C9orf78Q9NZ63 289 aaPredicted RBP24■■□□□ 1.43
SSH3-209ENST00000532600 UTYO14607 1347 aa24■■□□□ 1.43
SSH3-209ENST00000532600 GGA3Q9NZ52 723 aa23.99■■□□□ 1.43
SSH3-209ENST00000532600 USP17L8P0C7I0 530 aa23.98■■□□□ 1.43
SSH3-209ENST00000532600 AOC2O75106 756 aa23.97■■□□□ 1.43
SSH3-209ENST00000532600 SCARF1Q14162 830 aa23.97■■□□□ 1.43
SSH3-209ENST00000532600 STRIP1Q5VSL9 837 aa23.97■■□□□ 1.43
SSH3-209ENST00000532600 MYOZ2Q9NPC6 264 aa23.97■■□□□ 1.43
SSH3-209ENST00000532600 PTPRCP08575 1304 aa23.96■■□□□ 1.43
SSH3-209ENST00000532600 C15orf52Q6ZUT6 534 aaKnown RBP23.96■■□□□ 1.43
SSH3-209ENST00000532600 PAXIP1Q6ZW49 1069 aaPredicted RBP23.96■■□□□ 1.43
SSH3-209ENST00000532600 DCPSQ96C86 337 aaKnown RBP23.96■■□□□ 1.43
SSH3-209ENST00000532600 GRM1Q13255 1194 aa23.95■■□□□ 1.42
SSH3-209ENST00000532600 ANGEL2Q5VTE6 544 aaKnown RBP23.95■■□□□ 1.42
SSH3-209ENST00000532600 ANKRD44Q8N8A2 993 aa23.95■■□□□ 1.42
SSH3-209ENST00000532600 HHIPL1Q96JK4 782 aa23.95■■□□□ 1.42
SSH3-209ENST00000532600 CD209Q9NNX6 404 aa23.95■■□□□ 1.42
SSH3-209ENST00000532600 ECE1P42892 770 aa23.94■■□□□ 1.42
SSH3-209ENST00000532600 KCNJ4P48050 445 aa23.94■■□□□ 1.42
SSH3-209ENST00000532600 CCDC57Q2TAC2 916 aa23.94■■□□□ 1.42
SSH3-209ENST00000532600 FBXW7Q969H0 707 aa23.94■■□□□ 1.42
SSH3-209ENST00000532600 PUS3Q9BZE2 481 aaKnown RBP23.94■■□□□ 1.42
SSH3-209ENST00000532600 SCAF8Q9UPN6 1271 aaKnown RBP23.94■■□□□ 1.42
SSH3-209ENST00000532600 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
SSH3-209ENST00000532600 RABL6Q3YEC7 729 aaPredicted RBP23.93■■□□□ 1.42
SSH3-209ENST00000532600 TTLL5Q6EMB2 1281 aa23.93■■□□□ 1.42
SSH3-209ENST00000532600 LDHAL6AQ6ZMR3 332 aa23.93■■□□□ 1.42
SSH3-209ENST00000532600 BICC1Q9H694 974 aaKnown RBP23.93■■□□□ 1.42
SSH3-209ENST00000532600 GTF2IP78347 998 aa23.92■■□□□ 1.42
SSH3-209ENST00000532600 NBPF9Q3BBW0 867 aa23.92■■□□□ 1.42
SSH3-209ENST00000532600 TNS4Q8IZW8 715 aa23.92■■□□□ 1.42
SSH3-209ENST00000532600 USP44Q9H0E7 712 aa23.92■■□□□ 1.42
SSH3-209ENST00000532600 HSPA8P11142 646 aaKnown RBP23.91■■□□□ 1.42
SSH3-209ENST00000532600 CTCFP49711 727 aaPredicted RBP23.91■■□□□ 1.42
SSH3-209ENST00000532600 MAP2K1Q02750 393 aaPredicted RBP23.91■■□□□ 1.42
SSH3-209ENST00000532600 SULF1Q8IWU6 871 aa23.91■■□□□ 1.42
SSH3-209ENST00000532600 CERS5Q8N5B7 392 aa23.91■■□□□ 1.42
SSH3-209ENST00000532600 AIDAQ96BJ3 306 aa23.91■■□□□ 1.42
SSH3-209ENST00000532600 CDCA5Q96FF9 252 aa23.91■■□□□ 1.42
SSH3-209ENST00000532600 ZIC5Q96T25 663 aa23.91■■□□□ 1.42
SSH3-209ENST00000532600 GBA2Q9HCG7 927 aaPredicted RBP23.91■■□□□ 1.42
SSH3-209ENST00000532600 MYO3BQ8WXR4 1341 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 PLIN1O60240 522 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 IL1R1P14778 569 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 HUNKP57058 714 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 TAF7LQ5H9L4 462 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 CNNM1Q9NRU3 951 aa23.9■■□□□ 1.42
SSH3-209ENST00000532600 PITPNM2Q9BZ72 1349 aa23.89■■□□□ 1.42
SSH3-209ENST00000532600 WNT10BO00744 389 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 MAP2K2P36507 400 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 LBX1P52954 281 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 KIAA0825Q8IV33 1275 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 ZBED3Q96IU2 234 aaPredicted RBP23.89■■□□□ 1.41
SSH3-209ENST00000532600 PRDM10Q9NQV6 1147 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 RIPOR2Q9Y4F9 1068 aa23.89■■□□□ 1.41
SSH3-209ENST00000532600 FAM155AB1AL88 458 aaPredicted RBP23.88■■□□□ 1.41
SSH3-209ENST00000532600 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
SSH3-209ENST00000532600 SASH1O94885 1247 aa23.87■■□□□ 1.41
SSH3-209ENST00000532600 LRRC24Q50LG9 513 aa23.86■■□□□ 1.41
SSH3-209ENST00000532600 OGFOD1Q8N543 542 aa23.86■■□□□ 1.41
SSH3-209ENST00000532600 C2orf69Q8N8R5 385 aa23.86■■□□□ 1.41
SSH3-209ENST00000532600 KLHDC4Q8TBB5 520 aa23.86■■□□□ 1.41
SSH3-209ENST00000532600 PRAMEF18Q5VWM3 479 aa23.85■■□□□ 1.41
SSH3-209ENST00000532600 ZNF804AQ7Z570 1209 aa23.85■■□□□ 1.41
SSH3-209ENST00000532600 NOB1Q9ULX3 412 aaKnown RBP23.85■■□□□ 1.41
SSH3-209ENST00000532600 JAG2Q9Y219 1238 aa23.85■■□□□ 1.41
SSH3-209ENST00000532600 PCDHAC2Q9Y5I4 1007 aa23.85■■□□□ 1.41
SSH3-209ENST00000532600 CT47B1P0C2W7 299 aaPredicted RBP23.84■■□□□ 1.41
SSH3-209ENST00000532600 BRPF1P55201 1214 aaPredicted RBP23.84■■□□□ 1.41
SSH3-209ENST00000532600 UBE4AQ14139 1066 aa23.84■■□□□ 1.41
SSH3-209ENST00000532600 RGMBQ6NW40 437 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 416 ms