RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ERVV-2B6SEH9 535 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 GNAI2P04899 355 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 SPTLC3Q9NUV7 552 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 VPS18Q9P253 973 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 KINO60870 393 aaKnown RBP7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 TUBB4AP04350 444 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 PDCP20941 246 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 SATB1Q01826 763 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 NUCB1Q02818 461 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 PALLDQ8WX93 1383 aa7.86□□□□□ -1.15
TGFBR3-209ENST00000532540 GUCY2CP25092 1073 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 MCM6Q14566 821 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 SART3Q15020 963 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 CKAP2LQ8IYA6 745 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 TMX3Q96JJ7 454 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 SDF4Q9BRK5 362 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 LMBR1LQ6UX01 489 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 FMNL3Q8IVF7 1028 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 CPSF2Q9P2I0 782 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 A0A1B0GUA9 196 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 C6orf229H3BNL8 230 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 EBAG9O00559 213 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 NEBLO76041 1014 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 CYP2C19P33261 490 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 DNAJC21Q5F1R6 531 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 MCTP2Q6DN12 878 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 CEP57L1Q8IYX8 460 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 MRPL50Q8N5N7 158 aaKnown RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 ZNF594Q96JF6 807 aaPredicted RBP7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 LRRCC1Q9C099 1032 aa7.85□□□□□ -1.15
TGFBR3-209ENST00000532540 PES1O00541 588 aaKnown RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 CAVIN2O95810 425 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 GNAI3P08754 354 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 NBPF7P0C2Y1 421 aaPredicted RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 ERC1Q8IUD2 1116 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 TEX13AQ9BXU3 409 aaPredicted RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 DDX21Q9NR30 783 aaKnown RBP eCLIP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 SNRKQ9NRH2 765 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 DNAI1Q9UI46 699 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 CCDC196A0A1B0GTZ2 297 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 ZSCAN12O43309 604 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 DCCP43146 1447 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 MAGEA9P43362 315 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 SMC1AQ14683 1233 aaKnown RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 NBPF11Q86T75 865 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 TICAM2Q86XR7 235 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 ARHGEF28Q8N1W1 1705 aaKnown RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 CWC25Q9NXE8 425 aaPredicted RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 ZBTB12Q9Y330 459 aaPredicted RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 HLFQ16534 295 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 ERCC6LQ2NKX8 1250 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 PDILTQ8N807 584 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 RPGRQ92834 1020 aaKnown RBP7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 CXorf56Q9H5V9 222 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 MRVI1Q9Y6F6 885 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 LAMC1P11047 1609 aa7.84□□□□□ -1.15
TGFBR3-209ENST00000532540 POTEB2H3BUK9 544 aa7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 ERLIN2O94905 339 aa7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 CCT4P50991 539 aaKnown RBP7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 FBXO38Q6PIJ6 1188 aa7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 KSR2Q6VAB6 950 aa7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 UPF3BQ9BZI7 483 aaKnown RBP7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 DDX19AQ9NUU7 478 aaKnown RBP7.84□□□□□ -1.16
TGFBR3-209ENST00000532540 NRXN3Q9Y4C0 1643 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 ZKSCAN1P17029 563 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 GBP2P32456 591 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 ITPK1Q13572 414 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 SLC4A8Q2Y0W8 1093 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 SAMD1Q6SPF0 538 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 LDHAL6AQ6ZMR3 332 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 KIAA1328Q86T90 577 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 FNBP4Q8N3X1 1017 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 CEP120Q8N960 986 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 CRACR2AQ9BSW2 395 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 CNPY2Q9Y2B0 182 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 THRAP3Q9Y2W1 955 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 RAD50Q92878 1312 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 ACTN2P35609 894 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 METTL24Q5JXM2 366 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 AP1ARQ63HQ0 302 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 PPP1R42Q7Z4L9 355 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 MYO6Q9UM54 1294 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 RTL1A6NKG5 1358 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 CCDC69A6NI79 296 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 IRS4O14654 1257 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 RAD21O60216 631 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 EZRP15311 586 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 ANO6Q4KMQ2 910 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 MMS22LQ6ZRQ5 1243 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms