RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 IFIT1P09914 478 aaKnown RBP27.54■■■□□ 2
LRRK1-208ENST00000532029 SLC5A1P13866 664 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 KLRK1P26718 216 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 EIF6P56537 245 aaKnown RBP27.54■■■□□ 2
LRRK1-208ENST00000532029 ATP2B3Q16720 1220 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 ERC1Q8IUD2 1116 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 LPIN2Q92539 896 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 AKAP2Q9Y2D5 859 aa27.54■■■□□ 2
LRRK1-208ENST00000532029 ECE2O60344 883 aa27.53■■■□□ 2
LRRK1-208ENST00000532029 TXNRD3Q86VQ6 643 aa27.53■■■□□ 2
LRRK1-208ENST00000532029 FZD9O00144 591 aa27.52■■■□□ 2
LRRK1-208ENST00000532029 SASH1O94885 1247 aa27.52■■■□□ 2
LRRK1-208ENST00000532029 FGFR2P21802 821 aa27.52■■■□□ 2
LRRK1-208ENST00000532029 ZNF804AQ7Z570 1209 aa27.52■■■□□ 2
LRRK1-208ENST00000532029 COA1Q9GZY4 146 aa27.51■■□□□ 1.99
LRRK1-208ENST00000532029 IRS2Q9Y4H2 1338 aa27.5■■□□□ 1.99
LRRK1-208ENST00000532029 CAVIN4Q5BKX8 364 aa27.5■■□□□ 1.99
LRRK1-208ENST00000532029 DPY19L2Q6NUT2 758 aa27.5■■□□□ 1.99
LRRK1-208ENST00000532029 RAB11FIP3O75154 756 aa27.49■■□□□ 1.99
LRRK1-208ENST00000532029 NEFLP07196 543 aa27.49■■□□□ 1.99
LRRK1-208ENST00000532029 PODNQ7Z5L7 613 aa27.49■■□□□ 1.99
LRRK1-208ENST00000532029 VPS37DQ86XT2 251 aa27.49■■□□□ 1.99
LRRK1-208ENST00000532029 ZNF541Q9H0D2 1346 aa27.48■■□□□ 1.99
LRRK1-208ENST00000532029 APBB1O00213 710 aa27.48■■□□□ 1.99
LRRK1-208ENST00000532029 HIBADHP31937 336 aaKnown RBP27.48■■□□□ 1.99
LRRK1-208ENST00000532029 GYG1P46976 350 aa27.48■■□□□ 1.99
LRRK1-208ENST00000532029 GPR108Q9NPR9 543 aa27.48■■□□□ 1.99
LRRK1-208ENST00000532029 A0A1B0GUL7 405 aa27.47■■□□□ 1.99
LRRK1-208ENST00000532029 YDJCA8MPS7 323 aa27.47■■□□□ 1.99
LRRK1-208ENST00000532029 FAM84BQ96KN1 310 aaPredicted RBP27.47■■□□□ 1.99
LRRK1-208ENST00000532029 NEUROD6Q96NK8 337 aa27.47■■□□□ 1.99
LRRK1-208ENST00000532029 CD209Q9NNX6 404 aa27.47■■□□□ 1.99
LRRK1-208ENST00000532029 RAD17O75943 681 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 TIMM10P62072 90 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 TNIP1Q15025 636 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 CIAPIN1Q6FI81 312 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 RHPN1Q8TCX5 695 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 KIF1BPQ96EK5 621 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 DCTPP1Q9H773 170 aa27.46■■□□□ 1.99
LRRK1-208ENST00000532029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.46■■□□□ 1.99
LRRK1-208ENST00000532029 ZNF609O15014 1411 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 GLTPD2A6NH11 291 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 CXCL9Q07325 125 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 HDAC1Q13547 482 aaPredicted RBP27.45■■□□□ 1.98
LRRK1-208ENST00000532029 TNNI3KQ59H18 835 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.98
LRRK1-208ENST00000532029 GJA3Q9Y6H8 435 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 FPGT-TNNI3KV9GXZ4 949 aa27.45■■□□□ 1.98
LRRK1-208ENST00000532029 KDM2BQ8NHM5 1336 aa27.44■■□□□ 1.98
LRRK1-208ENST00000532029 FBXO33Q7Z6M2 555 aa27.44■■□□□ 1.98
LRRK1-208ENST00000532029 DDNO94850 711 aaPredicted RBP27.43■■□□□ 1.98
LRRK1-208ENST00000532029 BCAMP50895 628 aa27.43■■□□□ 1.98
LRRK1-208ENST00000532029 GPC2Q8N158 579 aa27.43■■□□□ 1.98
LRRK1-208ENST00000532029 IL1R1P14778 569 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 ADORA1P30542 326 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 GORABQ5T7V8 394 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 ZNF526Q8TF50 670 aaPredicted RBP27.42■■□□□ 1.98
LRRK1-208ENST00000532029 FBXW7Q969H0 707 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 XAGE2Q96GT9 111 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 IL1RAPL2Q9NP60 686 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 KCNQ5Q9NR82 932 aa27.42■■□□□ 1.98
LRRK1-208ENST00000532029 USP17L3A6NCW0 530 aa27.41■■□□□ 1.98
LRRK1-208ENST00000532029 USP17L4A6NCW7 530 aa27.41■■□□□ 1.98
LRRK1-208ENST00000532029 FRAT2O75474 233 aaPredicted RBP27.41■■□□□ 1.98
LRRK1-208ENST00000532029 USP17L1Q7RTZ2 530 aa27.41■■□□□ 1.98
LRRK1-208ENST00000532029 CLASRPQ8N2M8 674 aaKnown RBP27.41■■□□□ 1.98
LRRK1-208ENST00000532029 LRRCC1Q9C099 1032 aa27.41■■□□□ 1.98
LRRK1-208ENST00000532029 GNL3LQ9NVN8 582 aaKnown RBP27.41■■□□□ 1.98
LRRK1-208ENST00000532029 ARAP2Q8WZ64 1704 aa27.41■■□□□ 1.98
LRRK1-208ENST00000532029 PSMD14O00487 310 aa27.4■■□□□ 1.98
LRRK1-208ENST00000532029 TDRD7Q8NHU6 1098 aaKnown RBP27.4■■□□□ 1.98
LRRK1-208ENST00000532029 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
LRRK1-208ENST00000532029 AACSQ86V21 672 aa27.39■■□□□ 1.98
LRRK1-208ENST00000532029 GTF2IP78347 998 aa27.38■■□□□ 1.97
LRRK1-208ENST00000532029 STRIP1Q5VSL9 837 aa27.38■■□□□ 1.97
LRRK1-208ENST00000532029 CCDC102BQ68D86 513 aa27.38■■□□□ 1.97
LRRK1-208ENST00000532029 TTLL5Q6EMB2 1281 aa27.38■■□□□ 1.97
LRRK1-208ENST00000532029 EAF2Q96CJ1 260 aaPredicted RBP27.38■■□□□ 1.97
LRRK1-208ENST00000532029 GCC1Q96CN9 775 aa27.38■■□□□ 1.97
LRRK1-208ENST00000532029 CCDC8Q9H0W5 538 aaPredicted RBP27.38■■□□□ 1.97
LRRK1-208ENST00000532029 IQSEC3Q9UPP2 1182 aaPredicted RBP27.38■■□□□ 1.97
LRRK1-208ENST00000532029 VIL1P09327 827 aaKnown RBP27.37■■□□□ 1.97
LRRK1-208ENST00000532029 PHKA1P46020 1223 aa27.37■■□□□ 1.97
LRRK1-208ENST00000532029 DBNDD2Q9BQY9 259 aa27.37■■□□□ 1.97
LRRK1-208ENST00000532029 ZBTB47Q9UFB7 747 aaPredicted RBP27.37■■□□□ 1.97
LRRK1-208ENST00000532029 GPBP1L1Q9HC44 474 aaPredicted RBP27.36■■□□□ 1.97
LRRK1-208ENST00000532029 SCN9AQ15858 1988 aa27.36■■□□□ 1.97
LRRK1-208ENST00000532029 IFIT2P09913 472 aaKnown RBP27.35■■□□□ 1.97
LRRK1-208ENST00000532029 CCDC158Q5M9N0 1113 aa27.35■■□□□ 1.97
LRRK1-208ENST00000532029 RSBN1LQ6PCB5 846 aaPredicted RBP27.35■■□□□ 1.97
LRRK1-208ENST00000532029 L3MBTL3Q96JM7 780 aaPredicted RBP27.35■■□□□ 1.97
LRRK1-208ENST00000532029 SEMA3EO15041 775 aa27.34■■□□□ 1.97
LRRK1-208ENST00000532029 SMARCA5O60264 1052 aaPredicted RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 IGHDP01880 384 aa27.34■■□□□ 1.97
LRRK1-208ENST00000532029 RPS12P25398 132 aaKnown RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 LMOD1P29536 600 aaPredicted RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 GMPSP49915 693 aaPredicted RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 CHAF1AQ13111 956 aaPredicted RBP27.34■■□□□ 1.97
LRRK1-208ENST00000532029 DACT2Q5SW24 774 aa27.34■■□□□ 1.97
LRRK1-208ENST00000532029 DBNLQ9UJU6 430 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms