RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PIAS4Q8N2W9 510 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 PLEKHF1Q96S99 279 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 MPHOSPH8Q99549 860 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 CPSF2Q9P2I0 782 aaKnown RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 CAPN7Q9Y6W3 813 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 SSH2Q76I76 1423 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 ATP10DQ9P241 1426 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 CCP110O43303 1012 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 LARGE1O95461 756 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 FAM163BP0C2L3 166 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 AK2P54819 239 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 TBC1D25Q3MII6 688 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 ANKRD18AQ8IVF6 992 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 PARD3BQ8TEW8 1205 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 WDR24Q96S15 920 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 PNKPQ96T60 521 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 OSBPL3Q9H4L5 887 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 GLI2P10070 1586 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 DIP2CQ9Y2E4 1556 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 NPHP3Q7Z494 1330 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 ARHGEF28Q8N1W1 1705 aaKnown RBP8.97□□□□□ -0.97
PTPRK-219ENST00000531050 VPS37CA5D8V6 355 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-219ENST00000531050 VWA3AA6NCI4 1184 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 APBB1O00213 710 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 EBAG9O00559 213 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 PRPF6O94906 941 aaKnown RBP8.97□□□□□ -0.97
PTPRK-219ENST00000531050 CASP8Q14790 479 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 SLC5A9Q2M3M2 681 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 HSP90B2PQ58FF3 399 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 TLDC1Q6P9B6 456 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 ANKRD23Q86SG2 305 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 AFAP1L1Q8TED9 768 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 PAIP2Q9BPZ3 127 aaKnown RBP8.97□□□□□ -0.97
PTPRK-219ENST00000531050 KIF9Q9HAQ2 790 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 STAG3Q9UJ98 1225 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
PTPRK-219ENST00000531050 NSD3Q9BZ95 1437 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 FRMD3A2A2Y4 597 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 BECN2A8MW95 431 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 RNF40O75150 1001 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 SKAP2O75563 359 aaPredicted RBP8.96□□□□□ -0.97
PTPRK-219ENST00000531050 FSBPO95073 299 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 SNUPNO95149 360 aaKnown RBP8.96□□□□□ -0.97
PTPRK-219ENST00000531050 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.97
PTPRK-219ENST00000531050 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.97
PTPRK-219ENST00000531050 HSPA4P34932 840 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 CLNS1AP54105 237 aaKnown RBP8.96□□□□□ -0.97
PTPRK-219ENST00000531050 PDE1AP54750 535 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 STX1AQ16623 288 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 TMC6Q7Z403 805 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 KLHL23Q8NBE8 558 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 CFAP53Q96M91 514 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 ACBD3Q9H3P7 528 aa8.96□□□□□ -0.97
PTPRK-219ENST00000531050 NEXMIFQ5QGS0 1516 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 A0A087WWV3 80 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 PSMD2Q13200 908 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 SNX1Q13596 522 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 MSANTD4Q8NCY6 345 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 BICD2Q8TD16 824 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 PGBD1Q96JS3 809 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 NEO1Q92859 1461 aa8.96□□□□□ -0.98
PTPRK-219ENST00000531050 ARHGEF40Q8TER5 1519 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 RICTORQ6R327 1708 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 A0A1B0GUA9 196 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 SYF2O95926 243 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 GCKP35557 465 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 CDCA2Q69YH5 1023 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 GGT6Q6P531 493 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 KIRREL3Q8IZU9 778 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 LEO1Q8WVC0 666 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 DHX58Q96C10 678 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 THUMPD2Q9BTF0 503 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 C14orf93Q9H972 538 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 LRRIQ3A6PVS8 624 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 RBBP5Q15291 538 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 ARMC3Q5W041 872 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 FERMT3Q86UX7 667 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 CCDC83Q8IWF9 413 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 XPO4Q9C0E2 1151 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 IL25Q9H293 177 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 DDX20Q9UHI6 824 aaKnown RBP8.95□□□□□ -0.98
PTPRK-219ENST00000531050 CDHR2Q9BYE9 1310 aa8.95□□□□□ -0.98
PTPRK-219ENST00000531050 VAMP4O75379 141 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 IBSPP21815 317 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 AARSP49588 968 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ACTN3Q08043 901 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 TSHZ3Q63HK5 1081 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 CEP85Q6P2H3 762 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 TRIM74Q86UV6 250 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 TRIM73Q86UV7 250 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 AOPEPQ8N6M6 819 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms