RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 LRRFIP2Q9Y608 721 aaKnown RBP21.74■■□□□ 1.07
USP35-202ENST00000528910 MROH5Q6ZUA9 1318 aa21.74■■□□□ 1.07
USP35-202ENST00000528910 GNAI3P08754 354 aa21.73■■□□□ 1.07
USP35-202ENST00000528910 HELBQ8NG08 1087 aaPredicted RBP21.73■■□□□ 1.07
USP35-202ENST00000528910 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
USP35-202ENST00000528910 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
USP35-202ENST00000528910 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
USP35-202ENST00000528910 MYH13Q9UKX3 1938 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 SHTN1A0MZ66 631 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 SNAP23O00161 211 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 HTRA3P83110 453 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 RSBN1LQ6PCB5 846 aaPredicted RBP21.71■■□□□ 1.07
USP35-202ENST00000528910 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 VGLL2Q8N8G2 317 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 AGBL3Q8NEM8 1001 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 KLHDC4Q8TBB5 520 aa21.71■■□□□ 1.07
USP35-202ENST00000528910 CNOT7Q9UIV1 285 aaKnown RBP21.71■■□□□ 1.07
USP35-202ENST00000528910 USP17L3A6NCW0 530 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 USP17L4A6NCW7 530 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 PTPN12Q05209 780 aaKnown RBP21.7■■□□□ 1.06
USP35-202ENST00000528910 MTX1Q13505 466 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 UBE4AQ14139 1066 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 LRRC24Q50LG9 513 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 USP17L1Q7RTZ2 530 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 GMLQ99445 158 aa21.7■■□□□ 1.06
USP35-202ENST00000528910 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
USP35-202ENST00000528910 DACT2Q5SW24 774 aa21.69■■□□□ 1.06
USP35-202ENST00000528910 TRPM4Q8TD43 1214 aa21.69■■□□□ 1.06
USP35-202ENST00000528910 CD209Q9NNX6 404 aa21.69■■□□□ 1.06
USP35-202ENST00000528910 FBXO3Q9UK99 471 aa21.69■■□□□ 1.06
USP35-202ENST00000528910 CLEC11AQ9Y240 323 aa21.69■■□□□ 1.06
USP35-202ENST00000528910 H7C1D1 291 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 EYA2O00167 538 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 STRIP1Q5VSL9 837 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
USP35-202ENST00000528910 DZIP1LQ8IYY4 767 aaKnown RBP21.68■■□□□ 1.06
USP35-202ENST00000528910 PGAP2Q9UHJ9 254 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 MYO3BQ8WXR4 1341 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 ECM29Q5VYK3 1845 aa21.68■■□□□ 1.06
USP35-202ENST00000528910 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
USP35-202ENST00000528910 PLIN1O60240 522 aa21.67■■□□□ 1.06
USP35-202ENST00000528910 RLBP1P12271 317 aa21.67■■□□□ 1.06
USP35-202ENST00000528910 IL1R1P14778 569 aa21.67■■□□□ 1.06
USP35-202ENST00000528910 HIRAP54198 1017 aaPredicted RBP21.67■■□□□ 1.06
USP35-202ENST00000528910 ZNF280AP59817 542 aaPredicted RBP21.67■■□□□ 1.06
USP35-202ENST00000528910 METTL24Q5JXM2 366 aa21.67■■□□□ 1.06
USP35-202ENST00000528910 ZNF804AQ7Z570 1209 aa21.67■■□□□ 1.06
USP35-202ENST00000528910 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
USP35-202ENST00000528910 ZC3H15Q8WU90 426 aaKnown RBP21.67■■□□□ 1.06
USP35-202ENST00000528910 CIAO1O76071 339 aa21.66■■□□□ 1.06
USP35-202ENST00000528910 PDE8BO95263 885 aa21.66■■□□□ 1.06
USP35-202ENST00000528910 CNTROBQ8N137 903 aa21.66■■□□□ 1.06
USP35-202ENST00000528910 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
USP35-202ENST00000528910 EGFRP00533 1210 aa21.65■■□□□ 1.06
USP35-202ENST00000528910 ATG9AQ7Z3C6 839 aa21.65■■□□□ 1.06
USP35-202ENST00000528910 SAMD7Q7Z3H4 446 aa21.65■■□□□ 1.06
USP35-202ENST00000528910 GNAI2P04899 355 aa21.64■■□□□ 1.05
USP35-202ENST00000528910 KIF4BQ2VIQ3 1234 aa21.64■■□□□ 1.05
USP35-202ENST00000528910 RCAN3Q9UKA8 241 aa21.64■■□□□ 1.05
USP35-202ENST00000528910 USP17L8P0C7I0 530 aa21.63■■□□□ 1.05
USP35-202ENST00000528910 FGFR2P21802 821 aa21.63■■□□□ 1.05
USP35-202ENST00000528910 PUM3Q15397 648 aaKnown RBP21.63■■□□□ 1.05
USP35-202ENST00000528910 TTLL5Q6EMB2 1281 aa21.63■■□□□ 1.05
USP35-202ENST00000528910 DNAJC5GQ8N7S2 189 aa21.63■■□□□ 1.05
USP35-202ENST00000528910 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
USP35-202ENST00000528910 GTF2IP78347 998 aa21.62■■□□□ 1.05
USP35-202ENST00000528910 TBC1D10BQ4KMP7 808 aaPredicted RBP21.62■■□□□ 1.05
USP35-202ENST00000528910 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
USP35-202ENST00000528910 FAM84BQ96KN1 310 aaPredicted RBP21.62■■□□□ 1.05
USP35-202ENST00000528910 MXD3Q9BW11 206 aa21.62■■□□□ 1.05
USP35-202ENST00000528910 SRGAP3O43295 1099 aa21.61■■□□□ 1.05
USP35-202ENST00000528910 GYG1P46976 350 aa21.61■■□□□ 1.05
USP35-202ENST00000528910 MMP14P50281 582 aa21.61■■□□□ 1.05
USP35-202ENST00000528910 FKBP1AP62942 108 aaKnown RBP21.61■■□□□ 1.05
USP35-202ENST00000528910 TDRD7Q8NHU6 1098 aaKnown RBP21.61■■□□□ 1.05
USP35-202ENST00000528910 FBXW7Q969H0 707 aa21.61■■□□□ 1.05
USP35-202ENST00000528910 PA2G4Q9UQ80 394 aaKnown RBP21.61■■□□□ 1.05
USP35-202ENST00000528910 FAM205AQ6ZU69 1335 aa21.6■■□□□ 1.05
USP35-202ENST00000528910 HIBADHP31937 336 aaKnown RBP21.6■■□□□ 1.05
USP35-202ENST00000528910 IL15P40933 162 aaPredicted RBP21.6■■□□□ 1.05
USP35-202ENST00000528910 FBXO33Q7Z6M2 555 aa21.6■■□□□ 1.05
USP35-202ENST00000528910 SIL1Q9H173 461 aa21.6■■□□□ 1.05
USP35-202ENST00000528910 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
USP35-202ENST00000528910 MS4A1P11836 297 aa21.59■■□□□ 1.05
USP35-202ENST00000528910 CERS5Q8N5B7 392 aa21.59■■□□□ 1.05
USP35-202ENST00000528910 PANK1Q8TE04 598 aa21.59■■□□□ 1.05
USP35-202ENST00000528910 MYOZ2Q9NPC6 264 aa21.59■■□□□ 1.05
USP35-202ENST00000528910 SASH1O94885 1247 aa21.58■■□□□ 1.05
USP35-202ENST00000528910 LPIN2Q92539 896 aa21.58■■□□□ 1.05
USP35-202ENST00000528910 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 TMEM88BA6NKF7 163 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 IFIT1P09914 478 aaKnown RBP21.57■■□□□ 1.04
USP35-202ENST00000528910 SLC5A1P13866 664 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 CDC37L1Q7L3B6 337 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 KLRG1Q96E93 195 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 GLIS2Q9BZE0 524 aaPredicted RBP21.57■■□□□ 1.04
USP35-202ENST00000528910 THSD7BQ9C0I4 1608 aa21.57■■□□□ 1.04
USP35-202ENST00000528910 TRAF5O00463 557 aa21.56■■□□□ 1.04
USP35-202ENST00000528910 POLA2Q14181 598 aa21.56■■□□□ 1.04
USP35-202ENST00000528910 CAVIN4Q5BKX8 364 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms