RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 TUBB8Q3ZCM7 444 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 FKBP15Q5T1M5 1219 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 MICU3Q86XE3 530 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 SLC26A6Q9BXS9 759 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 ABCC4O15439 1325 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 WTAPQ15007 396 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 KAT14Q9H8E8 782 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 TFCP2Q12800 502 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 RNF168Q8IYW5 571 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-218ENST00000528232 PSMD1Q99460 953 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 MAP3K4Q9Y6R4 1608 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 ZBTB43O43298 467 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 BMP15O95972 392 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 GNAT2P19087 354 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 ZNF165P49910 485 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 SEPT6Q14141 434 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 HELLSQ9NRZ9 838 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 CASQ1P31415 396 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 ZGPATQ8N5A5 531 aaKnown RBP8.26□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC150Q8NCX0 1101 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 UTP14AQ9BVJ6 771 aaKnown RBP8.26□□□□□ -1.09
CTNND1-218ENST00000528232 TRMT2AQ8IZ69 625 aaKnown RBP8.26□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
CTNND1-218ENST00000528232 TAX1BP1Q86VP1 789 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 PPM1EQ8WY54 764 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-218ENST00000528232 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 PPP1R12BO60237 982 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-218ENST00000528232 KIF5CO60282 957 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 HSPA4P34932 840 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 ATP6V1AP38606 617 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 TNIP1Q15025 636 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 KLHL10Q6JEL2 608 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 PLBD2Q8NHP8 589 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 SLC4A4Q9Y6R1 1079 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 USP19O94966 1318 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 RTL1A6NKG5 1358 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 CLTCL1P53675 1640 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 ESR2Q92731 530 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 ALG1Q9BT22 464 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 EFCC1Q9HA90 598 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 AMPD3Q01432 767 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 SPA17Q15506 151 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 WWC2Q6AWC2 1192 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 MRPS27Q92552 414 aaKnown RBP8.25□□□□□ -1.09
CTNND1-218ENST00000528232 RTL9Q8NET4 1388 aa8.25□□□□□ -1.09
CTNND1-218ENST00000528232 XRCC6P12956 609 aaKnown RBP eCLIP8.24□□□□□ -1.092e-8■□□□□ 8.5
CTNND1-218ENST00000528232 CCDC96Q2M329 555 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 SPECC1LQ69YQ0 1117 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 ZNF790Q6PG37 636 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 TMC6Q7Z403 805 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 CUL5Q93034 780 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 KIF3CO14782 793 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 PRC1O43663 620 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 CYP7A1P22680 504 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 ST5P78524 1137 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 RTN1Q16799 776 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
CTNND1-218ENST00000528232 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 TNNT1P13805 278 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 SLC9C2Q5TAH2 1124 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 LRCH2Q5VUJ6 765 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 NBPF5PQ86XG9 351 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-218ENST00000528232 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 PLEKHF1Q96S99 279 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 PLEKHG1Q9ULL1 1385 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 ABCC3O15438 1527 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 YEATS4O95619 227 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 HCLS1P14317 486 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-218ENST00000528232 RFC4P35249 363 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 SYKP43405 635 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 TAF4BQ92750 862 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 CALML4Q96GE6 196 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 LRRC2Q9BYS8 371 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 CDC42BPBQ9Y5S2 1711 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
CTNND1-218ENST00000528232 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-218ENST00000528232 SLC52A2Q9HAB3 445 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
CTNND1-218ENST00000528232 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 LMAN1P49257 510 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 IFIT1BQ5T764 474 aaKnown RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 DHX32Q7L7V1 743 aaKnown RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 RMND1Q9NWS8 449 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 BIN1O00499 593 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms