RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 KRT32Q14532 448 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 ERFEQ4G0M1 354 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 ZSCAN31Q96LW9 406 aaPredicted RBP20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 ABCC12Q96J65 1359 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 GNPATO15228 680 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 HSPD1P10809 573 aaKnown RBP20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 CCDC102BQ68D86 513 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 LPIN2Q92539 896 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 SH2B1Q9NRF2 756 aaPredicted RBP20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
PCDHA6-202ENST00000527624 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 A0A0G2JLW4 131 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 ST3GAL1Q11201 340 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 LRRFIP1Q32MZ4 808 aaKnown RBP20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 GAS2L3Q86XJ1 694 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 DSCC1Q9BVC3 393 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 DDX49Q9Y6V7 483 aaKnown RBP20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 BTAF1O14981 1849 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
PCDHA6-202ENST00000527624 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 FGFR2P21802 821 aa20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 TBC1D9BQ66K14 1250 aa20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 IGHMBP2P38935 993 aaKnown RBP20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 TOB2Q14106 344 aaPredicted RBP20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 STOX1Q6ZVD7 989 aa20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
PCDHA6-202ENST00000527624 BCORQ6W2J9 1755 aa20.58■□□□□ 0.89
PCDHA6-202ENST00000527624 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.89
PCDHA6-202ENST00000527624 FOXD4L6Q3SYB3 417 aaPredicted RBP20.58■□□□□ 0.89
PCDHA6-202ENST00000527624 FOXD4L3Q6VB84 417 aaPredicted RBP20.58■□□□□ 0.89
PCDHA6-202ENST00000527624 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.88
PCDHA6-202ENST00000527624 ZNF512BQ96KM6 892 aaPredicted RBP20.58■□□□□ 0.88
PCDHA6-202ENST00000527624 PIH1D3Q9NQM4 214 aaKnown RBP20.58■□□□□ 0.88
PCDHA6-202ENST00000527624 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.88
PCDHA6-202ENST00000527624 PRPF40AO75400 957 aaKnown RBP20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 RPS6KA4O75676 772 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 SLC5A1P13866 664 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 NHSQ6T4R5 1651 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 GJB2P29033 226 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 RC3H1Q5TC82 1133 aaKnown RBP20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 SEPT12Q8IYM1 358 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 APPBP2Q92624 585 aa20.57■□□□□ 0.88
PCDHA6-202ENST00000527624 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
PCDHA6-202ENST00000527624 IDH1O75874 414 aaKnown RBP20.56■□□□□ 0.88
PCDHA6-202ENST00000527624 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
PCDHA6-202ENST00000527624 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.88
PCDHA6-202ENST00000527624 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
PCDHA6-202ENST00000527624 SYT1P21579 422 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 STK3Q13188 491 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 LRRC2Q9BYS8 371 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 ALDH8A1Q9H2A2 487 aaPredicted RBP20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 COL4A1P02462 1669 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 FOXP2O15409 715 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 SLC9C2Q5TAH2 1124 aa20.55■□□□□ 0.88
PCDHA6-202ENST00000527624 ZPR1O75312 459 aa20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 CHRNDQ07001 517 aa20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 Q6ZUG5 572 aa20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 TRPC5Q9UL62 973 aaPredicted RBP20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 RTCBQ9Y3I0 505 aaKnown RBP20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 AKAP11Q9UKA4 1901 aa20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 STX6O43752 255 aa20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
PCDHA6-202ENST00000527624 GPAA1O43292 621 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 ADD2P35612 726 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 LAMB2P55268 1798 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 ATRNO75882 1429 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 E7EWF7 191 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 PHF14O94880 888 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 BCAMP50895 628 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 CCDC24Q8N4L8 307 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
PCDHA6-202ENST00000527624 ZSCAN22P10073 491 aaPredicted RBP20.52■□□□□ 0.88
PCDHA6-202ENST00000527624 HAND2P61296 217 aa20.52■□□□□ 0.88
PCDHA6-202ENST00000527624 FGD1P98174 961 aa20.52■□□□□ 0.88
PCDHA6-202ENST00000527624 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
PCDHA6-202ENST00000527624 SCN7AQ01118 1682 aa20.52■□□□□ 0.88
PCDHA6-202ENST00000527624 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 SF3B3Q15393 1217 aaKnown RBP20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 BRF1Q92994 677 aa20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 ZNF532Q9HCE3 1301 aa20.51■□□□□ 0.87
PCDHA6-202ENST00000527624 FGAP02671 866 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms