RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 AGBL3Q8NEM8 1001 aa28.23■■■□□ 2.11
LMNB2-204ENST00000527409 ZC3H15Q8WU90 426 aaKnown RBP28.23■■■□□ 2.11
LMNB2-204ENST00000527409 CREBZFQ9NS37 354 aa28.23■■■□□ 2.11
LMNB2-204ENST00000527409 HDAC5Q9UQL6 1122 aa28.23■■■□□ 2.11
LMNB2-204ENST00000527409 SHTN1A0MZ66 631 aa28.22■■■□□ 2.11
LMNB2-204ENST00000527409 INTS3Q68E01 1043 aaKnown RBP28.22■■■□□ 2.11
LMNB2-204ENST00000527409 KLRK1P26718 216 aa28.21■■■□□ 2.11
LMNB2-204ENST00000527409 ATF7IPQ6VMQ6 1270 aa28.21■■■□□ 2.11
LMNB2-204ENST00000527409 TRPM4Q8TD43 1214 aa28.21■■■□□ 2.11
LMNB2-204ENST00000527409 KLRG1Q96E93 195 aa28.21■■■□□ 2.11
LMNB2-204ENST00000527409 PGAP2Q9UHJ9 254 aa28.21■■■□□ 2.11
LMNB2-204ENST00000527409 MROH5Q6ZUA9 1318 aa28.2■■■□□ 2.11
LMNB2-204ENST00000527409 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.11
LMNB2-204ENST00000527409 FRAT1Q92837 279 aaPredicted RBP28.2■■■□□ 2.1
LMNB2-204ENST00000527409 TRPM7Q96QT4 1865 aa28.19■■■□□ 2.1
LMNB2-204ENST00000527409 PLIN1O60240 522 aa28.19■■■□□ 2.1
LMNB2-204ENST00000527409 TRIM27P14373 513 aa28.19■■■□□ 2.1
LMNB2-204ENST00000527409 HIRAP54198 1017 aaPredicted RBP28.19■■■□□ 2.1
LMNB2-204ENST00000527409 STRIP1Q5VSL9 837 aa28.19■■■□□ 2.1
LMNB2-204ENST00000527409 PUS3Q9BZE2 481 aaKnown RBP28.19■■■□□ 2.1
LMNB2-204ENST00000527409 RIPOR2Q9Y4F9 1068 aa28.19■■■□□ 2.1
LMNB2-204ENST00000527409 MYO3BQ8WXR4 1341 aa28.18■■■□□ 2.1
LMNB2-204ENST00000527409 SNAP23O00161 211 aa28.18■■■□□ 2.1
LMNB2-204ENST00000527409 SAMD7Q7Z3H4 446 aa28.18■■■□□ 2.1
LMNB2-204ENST00000527409 ZNF804AQ7Z570 1209 aa28.18■■■□□ 2.1
LMNB2-204ENST00000527409 GMLQ99445 158 aa28.18■■■□□ 2.1
LMNB2-204ENST00000527409 TMEM88BA6NKF7 163 aa28.17■■■□□ 2.1
LMNB2-204ENST00000527409 UBE4AQ14139 1066 aa28.17■■■□□ 2.1
LMNB2-204ENST00000527409 TBC1D10BQ4KMP7 808 aaPredicted RBP28.17■■■□□ 2.1
LMNB2-204ENST00000527409 DACT2Q5SW24 774 aa28.17■■■□□ 2.1
LMNB2-204ENST00000527409 ZNF280AP59817 542 aaPredicted RBP28.16■■■□□ 2.1
LMNB2-204ENST00000527409 CD209Q9NNX6 404 aa28.16■■■□□ 2.1
LMNB2-204ENST00000527409 GNAI3P08754 354 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 USP17L8P0C7I0 530 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 KIF4BQ2VIQ3 1234 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 ZKSCAN2Q63HK3 967 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 FBXW7Q969H0 707 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 MEIS3Q99687 375 aa28.15■■■□□ 2.1
LMNB2-204ENST00000527409 LRRC24Q50LG9 513 aa28.14■■■□□ 2.1
LMNB2-204ENST00000527409 TTLL5Q6EMB2 1281 aa28.14■■■□□ 2.1
LMNB2-204ENST00000527409 LRRFIP2Q9Y608 721 aaKnown RBP28.14■■■□□ 2.1
LMNB2-204ENST00000527409 EGFRP00533 1210 aa28.13■■■□□ 2.09
LMNB2-204ENST00000527409 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
LMNB2-204ENST00000527409 METTL24Q5JXM2 366 aa28.13■■■□□ 2.09
LMNB2-204ENST00000527409 KLHDC4Q8TBB5 520 aa28.13■■■□□ 2.09
LMNB2-204ENST00000527409 IL1R1P14778 569 aa28.12■■■□□ 2.09
LMNB2-204ENST00000527409 MMP14P50281 582 aa28.12■■■□□ 2.09
LMNB2-204ENST00000527409 GTF2IP78347 998 aa28.12■■■□□ 2.09
LMNB2-204ENST00000527409 RBM26Q5T8P6 1007 aaKnown RBP28.12■■■□□ 2.09
LMNB2-204ENST00000527409 CDC37L1Q7L3B6 337 aa28.12■■■□□ 2.09
LMNB2-204ENST00000527409 PTPN12Q05209 780 aaKnown RBP28.11■■■□□ 2.09
LMNB2-204ENST00000527409 OGFOD1Q8N543 542 aa28.11■■■□□ 2.09
LMNB2-204ENST00000527409 JMYQ8N9B5 988 aa28.11■■■□□ 2.09
LMNB2-204ENST00000527409 CLUAP1Q96AJ1 413 aa28.11■■■□□ 2.09
LMNB2-204ENST00000527409 GLIS2Q9BZE0 524 aaPredicted RBP28.11■■■□□ 2.09
LMNB2-204ENST00000527409 TNNQ9UQP3 1299 aa28.11■■■□□ 2.09
LMNB2-204ENST00000527409 POLR2AP24928 1970 aaKnown RBP28.11■■■□□ 2.09
LMNB2-204ENST00000527409 EYA2O00167 538 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 TRAF5O00463 557 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 PDE8BO95263 885 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 VGLL2Q8N8G2 317 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 MYOZ2Q9NPC6 264 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 FBXO3Q9UK99 471 aa28.1■■■□□ 2.09
LMNB2-204ENST00000527409 DCPSQ96C86 337 aaKnown RBP28.09■■■□□ 2.09
LMNB2-204ENST00000527409 MXD3Q9BW11 206 aa28.09■■■□□ 2.09
LMNB2-204ENST00000527409 CNTNAP1P78357 1384 aa28.09■■■□□ 2.09
LMNB2-204ENST00000527409 HIBADHP31937 336 aaKnown RBP28.07■■■□□ 2.08
LMNB2-204ENST00000527409 FMR1Q06787 632 aaKnown RBP eCLIP28.07■■■□□ 2.082e-7■■□□□ 11.8
LMNB2-204ENST00000527409 MKRN1Q9UHC7 482 aaKnown RBP28.07■■■□□ 2.08
LMNB2-204ENST00000527409 CIAO1O76071 339 aa28.06■■■□□ 2.08
LMNB2-204ENST00000527409 FKBP1AP62942 108 aaKnown RBP28.06■■■□□ 2.08
LMNB2-204ENST00000527409 FTSJ3Q8IY81 847 aaKnown RBP28.06■■■□□ 2.08
LMNB2-204ENST00000527409 TMEM57Q8N5G2 664 aa28.06■■■□□ 2.08
LMNB2-204ENST00000527409 FAM84BQ96KN1 310 aaPredicted RBP28.06■■■□□ 2.08
LMNB2-204ENST00000527409 GGA3Q9NZ52 723 aa28.06■■■□□ 2.08
LMNB2-204ENST00000527409 HDAC9Q9UKV0 1011 aa28.06■■■□□ 2.08
LMNB2-204ENST00000527409 SASH1O94885 1247 aa28.05■■■□□ 2.08
LMNB2-204ENST00000527409 GYG1P46976 350 aa28.05■■■□□ 2.08
LMNB2-204ENST00000527409 PUM3Q15397 648 aaKnown RBP28.05■■■□□ 2.08
LMNB2-204ENST00000527409 CST9Q5W186 159 aa28.05■■■□□ 2.08
LMNB2-204ENST00000527409 KRT26Q7Z3Y9 468 aa28.05■■■□□ 2.08
LMNB2-204ENST00000527409 TDRD7Q8NHU6 1098 aaKnown RBP28.05■■■□□ 2.08
LMNB2-204ENST00000527409 ABT1Q9ULW3 272 aaKnown RBP28.05■■■□□ 2.08
LMNB2-204ENST00000527409 RASSF10A6NK89 507 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 GNAI2P04899 355 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 MTX1Q13505 466 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 SCARF1Q14162 830 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 CAVIN4Q5BKX8 364 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 ATG9AQ7Z3C6 839 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 USP48Q86UV5 1035 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 KIAA0825Q8IV33 1275 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 DZIP1LQ8IYY4 767 aaKnown RBP28.04■■■□□ 2.08
LMNB2-204ENST00000527409 ARAP2Q8WZ64 1704 aa28.04■■■□□ 2.08
LMNB2-204ENST00000527409 FAM205AQ6ZU69 1335 aa28.03■■■□□ 2.08
LMNB2-204ENST00000527409 PITPNM2Q9BZ72 1349 aa28.03■■■□□ 2.08
LMNB2-204ENST00000527409 CELF2O95319 508 aaKnown RBP28.03■■■□□ 2.08
LMNB2-204ENST00000527409 VPS37DQ86XT2 251 aa28.03■■■□□ 2.08
LMNB2-204ENST00000527409 SULF1Q8IWU6 871 aa28.03■■■□□ 2.08
LMNB2-204ENST00000527409 SIL1Q9H173 461 aa28.03■■■□□ 2.08
LMNB2-204ENST00000527409 COPRSQ9NQ92 184 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms