RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TTLL5Q6EMB2 1281 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 NSUN7Q8NE18 718 aaKnown RBP20.79■□□□□ 0.92
USH1C-205ENST00000527020 DDX11Q96FC9 970 aa20.79■□□□□ 0.92
USH1C-205ENST00000527020 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 GPTP24298 496 aa20.78■□□□□ 0.92
USH1C-205ENST00000527020 APOBRQ0VD83 1088 aa20.78■□□□□ 0.92
USH1C-205ENST00000527020 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 LEO1Q8WVC0 666 aaPredicted RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 LLPHQ9BRT6 129 aaKnown RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 SCAND2PQ9GZW5 306 aaPredicted RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 MYO5AQ9Y4I1 1855 aaKnown RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
USH1C-205ENST00000527020 RIPOR2Q9Y4F9 1068 aa20.78■□□□□ 0.92
USH1C-205ENST00000527020 TTLL11Q8NHH1 800 aa20.77■□□□□ 0.92
USH1C-205ENST00000527020 SPATA32Q96LK8 384 aa20.77■□□□□ 0.92
USH1C-205ENST00000527020 USP25Q9UHP3 1055 aa20.77■□□□□ 0.92
USH1C-205ENST00000527020 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.91
USH1C-205ENST00000527020 OFD1O75665 1012 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 FGD1P98174 961 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 GORABQ5T7V8 394 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 GREM2Q9H772 168 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 ZAP70P43403 619 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 PI16Q6UXB8 463 aa20.76■□□□□ 0.91
USH1C-205ENST00000527020 MCM5P33992 734 aa20.75■□□□□ 0.91
USH1C-205ENST00000527020 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
USH1C-205ENST00000527020 ABCC12Q96J65 1359 aa20.75■□□□□ 0.91
USH1C-205ENST00000527020 SALL1Q9NSC2 1324 aa20.75■□□□□ 0.91
USH1C-205ENST00000527020 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
USH1C-205ENST00000527020 PGBD1Q96JS3 809 aa20.75■□□□□ 0.91
USH1C-205ENST00000527020 ITGA6P23229 1130 aa20.74■□□□□ 0.91
USH1C-205ENST00000527020 CHST3Q7LGC8 479 aa20.74■□□□□ 0.91
USH1C-205ENST00000527020 DOT1LQ8TEK3 1739 aa20.74■□□□□ 0.91
USH1C-205ENST00000527020 PTPDC1A2A3K4 754 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 CTSWP56202 376 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 ATP2B3Q16720 1220 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 VGLL2Q8N8G2 317 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 NCOA5Q9HCD5 579 aaKnown RBP20.73■□□□□ 0.91
USH1C-205ENST00000527020 H3BQV1 296 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 PDIA3P30101 505 aaKnown RBP20.73■□□□□ 0.91
USH1C-205ENST00000527020 CCT2P78371 535 aaKnown RBP20.73■□□□□ 0.91
USH1C-205ENST00000527020 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 FBXL16Q8N461 479 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 PUS7LQ9H0K6 701 aaKnown RBP20.73■□□□□ 0.91
USH1C-205ENST00000527020 NUP62CLQ9H1M0 184 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
USH1C-205ENST00000527020 SLIT2O94813 1529 aa20.73■□□□□ 0.91
USH1C-205ENST00000527020 KDM4AO75164 1064 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 ADCY5O95622 1261 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 ADD1P35611 737 aaKnown RBP20.72■□□□□ 0.91
USH1C-205ENST00000527020 MCAMP43121 646 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 WASHC4Q2M389 1173 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 LRRFIP1Q32MZ4 808 aaKnown RBP20.72■□□□□ 0.91
USH1C-205ENST00000527020 METTL24Q5JXM2 366 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 APPBP2Q92624 585 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 DACT1Q9NYF0 836 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 AP5Z1O43299 807 aa20.72■□□□□ 0.91
USH1C-205ENST00000527020 NAA16Q6N069 864 aaPredicted RBP20.72■□□□□ 0.91
USH1C-205ENST00000527020 ZNF274Q96GC6 653 aaPredicted RBP20.72■□□□□ 0.91
USH1C-205ENST00000527020 COL22A1Q8NFW1 1626 aaPredicted RBP20.72■□□□□ 0.91
USH1C-205ENST00000527020 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
USH1C-205ENST00000527020 FGAP02671 866 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 CCDC192P0DO97 292 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 EVCP57679 992 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 CAMK4Q16566 473 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 GPHNQ9NQX3 736 aaPredicted RBP20.71■□□□□ 0.91
USH1C-205ENST00000527020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
USH1C-205ENST00000527020 LRP5O75197 1615 aa20.71■□□□□ 0.91
USH1C-205ENST00000527020 HAND2P61296 217 aa20.7■□□□□ 0.91
USH1C-205ENST00000527020 HMGN5P82970 282 aaKnown RBP20.7■□□□□ 0.91
USH1C-205ENST00000527020 RBM43Q6ZSC3 357 aaKnown RBP20.7■□□□□ 0.91
USH1C-205ENST00000527020 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
USH1C-205ENST00000527020 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
USH1C-205ENST00000527020 PTMAP06454 111 aaKnown RBP20.7■□□□□ 0.9
USH1C-205ENST00000527020 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
USH1C-205ENST00000527020 ARAP2Q8WZ64 1704 aa20.7■□□□□ 0.9
USH1C-205ENST00000527020 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.9
USH1C-205ENST00000527020 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
USH1C-205ENST00000527020 TRMT112Q9UI30 125 aaKnown RBP20.69■□□□□ 0.9
USH1C-205ENST00000527020 MRVI1Q9Y6F6 885 aa20.69■□□□□ 0.9
USH1C-205ENST00000527020 GOLGA6L4A6NEF3 574 aa20.69■□□□□ 0.9
USH1C-205ENST00000527020 NR1I2O75469 434 aa20.69■□□□□ 0.9
USH1C-205ENST00000527020 FOSBP53539 338 aa20.69■□□□□ 0.9
USH1C-205ENST00000527020 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
USH1C-205ENST00000527020 DDX19AQ9NUU7 478 aaKnown RBP20.69■□□□□ 0.9
USH1C-205ENST00000527020 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 EXOC5O00471 708 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 TYRO3Q06418 890 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
USH1C-205ENST00000527020 MB21D2Q8IYB1 491 aaPredicted RBP20.68■□□□□ 0.9
USH1C-205ENST00000527020 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
USH1C-205ENST00000527020 TNMDQ9H2S6 317 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 CLSTN2Q9H4D0 955 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 CNNM1Q9NRU3 951 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 TBC1D2BQ9UPU7 963 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 ATRNO75882 1429 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms