RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RRAGCQ9HB90 399 aa21.48■■□□□ 1.03
LMX1B-203ENST00000526117 COG6Q9Y2V7 657 aa21.48■■□□□ 1.03
LMX1B-203ENST00000526117 SCN9AQ15858 1988 aa21.48■■□□□ 1.03
LMX1B-203ENST00000526117 ZNF646O15015 1829 aaPredicted RBP21.48■■□□□ 1.03
LMX1B-203ENST00000526117 PNMA6EA0A0J9YXQ4 647 aa21.47■■□□□ 1.03
LMX1B-203ENST00000526117 RPS12P25398 132 aaKnown RBP21.47■■□□□ 1.03
LMX1B-203ENST00000526117 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
LMX1B-203ENST00000526117 G3V3G9 751 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 RAD17O75943 681 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 VIL1P09327 827 aaKnown RBP21.46■■□□□ 1.03
LMX1B-203ENST00000526117 FGFR2P21802 821 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 KLRK1P26718 216 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 SCNN1DP51172 638 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 C1QTNF8P60827 252 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
LMX1B-203ENST00000526117 DCAF8Q5TAQ9 597 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 DPF2Q92785 391 aa21.46■■□□□ 1.03
LMX1B-203ENST00000526117 SNAP23O00161 211 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 PSMD14O00487 310 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 ZBTB22O15209 634 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 TOMM70O94826 608 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 IL1R1P14778 569 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 ZNF804AQ7Z570 1209 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 HACL1Q9UJ83 578 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 PA2G4Q9UQ80 394 aaKnown RBP21.45■■□□□ 1.02
LMX1B-203ENST00000526117 GJA3Q9Y6H8 435 aa21.45■■□□□ 1.02
LMX1B-203ENST00000526117 RPAP2Q8IXW5 612 aaPredicted RBP21.44■■□□□ 1.02
LMX1B-203ENST00000526117 TAF1DQ9H5J8 278 aaPredicted RBP21.44■■□□□ 1.02
LMX1B-203ENST00000526117 CD209Q9NNX6 404 aa21.44■■□□□ 1.02
LMX1B-203ENST00000526117 GPRC5DQ9NZD1 345 aa21.44■■□□□ 1.02
LMX1B-203ENST00000526117 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 STRIP1Q5VSL9 837 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
LMX1B-203ENST00000526117 LPIN2Q92539 896 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 SIL1Q9H173 461 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 C1orf115Q9H7X2 142 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 CEP126Q9P2H0 1117 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
LMX1B-203ENST00000526117 ARAP2Q8WZ64 1704 aa21.43■■□□□ 1.02
LMX1B-203ENST00000526117 LMOD1P29536 600 aaPredicted RBP21.42■■□□□ 1.02
LMX1B-203ENST00000526117 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
LMX1B-203ENST00000526117 MMP14P50281 582 aa21.42■■□□□ 1.02
LMX1B-203ENST00000526117 PNMA8AQ86V59 439 aaPredicted RBP21.42■■□□□ 1.02
LMX1B-203ENST00000526117 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
LMX1B-203ENST00000526117 AGBL3Q8NEM8 1001 aa21.42■■□□□ 1.02
LMX1B-203ENST00000526117 FAM84BQ96KN1 310 aaPredicted RBP21.42■■□□□ 1.02
LMX1B-203ENST00000526117 KCNQ5Q9NR82 932 aa21.42■■□□□ 1.02
LMX1B-203ENST00000526117 MYO3BQ8WXR4 1341 aa21.41■■□□□ 1.02
LMX1B-203ENST00000526117 IFIT1P09914 478 aaKnown RBP21.41■■□□□ 1.02
LMX1B-203ENST00000526117 EPHX2P34913 555 aa21.41■■□□□ 1.02
LMX1B-203ENST00000526117 FKBP1AP62942 108 aaKnown RBP21.41■■□□□ 1.02
LMX1B-203ENST00000526117 RSBN1LQ6PCB5 846 aaPredicted RBP21.41■■□□□ 1.02
LMX1B-203ENST00000526117 FBXO33Q7Z6M2 555 aa21.41■■□□□ 1.02
LMX1B-203ENST00000526117 GMLQ99445 158 aa21.41■■□□□ 1.02
LMX1B-203ENST00000526117 SLC5A1P13866 664 aa21.4■■□□□ 1.02
LMX1B-203ENST00000526117 HIBADHP31937 336 aaKnown RBP21.4■■□□□ 1.02
LMX1B-203ENST00000526117 DACT2Q5SW24 774 aa21.4■■□□□ 1.02
LMX1B-203ENST00000526117 TDRD7Q8NHU6 1098 aaKnown RBP21.4■■□□□ 1.02
LMX1B-203ENST00000526117 ADARB2Q9NS39 739 aaKnown RBP21.4■■□□□ 1.02
LMX1B-203ENST00000526117 FSTL1Q12841 308 aa21.39■■□□□ 1.01
LMX1B-203ENST00000526117 ATP2B3Q16720 1220 aa21.39■■□□□ 1.01
LMX1B-203ENST00000526117 CAVIN4Q5BKX8 364 aa21.39■■□□□ 1.01
LMX1B-203ENST00000526117 USP50Q70EL3 339 aaPredicted RBP21.39■■□□□ 1.01
LMX1B-203ENST00000526117 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.01
LMX1B-203ENST00000526117 FAM205AQ6ZU69 1335 aa21.38■■□□□ 1.01
LMX1B-203ENST00000526117 SASH1O94885 1247 aa21.38■■□□□ 1.01
LMX1B-203ENST00000526117 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
LMX1B-203ENST00000526117 LDHDQ86WU2 507 aa21.38■■□□□ 1.01
LMX1B-203ENST00000526117 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
LMX1B-203ENST00000526117 HMMRO75330 724 aa21.37■■□□□ 1.01
LMX1B-203ENST00000526117 EPS15P42566 896 aa21.37■■□□□ 1.01
LMX1B-203ENST00000526117 GYG1P46976 350 aa21.37■■□□□ 1.01
LMX1B-203ENST00000526117 ZNF280AP59817 542 aaPredicted RBP21.37■■□□□ 1.01
LMX1B-203ENST00000526117 TTLL5Q6EMB2 1281 aa21.37■■□□□ 1.01
LMX1B-203ENST00000526117 CNOT7Q9UIV1 285 aaKnown RBP21.37■■□□□ 1.01
LMX1B-203ENST00000526117 ZBTB12Q9Y330 459 aaPredicted RBP21.37■■□□□ 1.01
LMX1B-203ENST00000526117 TFCP2Q12800 502 aa21.36■■□□□ 1.01
LMX1B-203ENST00000526117 AAMPQ13685 434 aa21.36■■□□□ 1.01
LMX1B-203ENST00000526117 SIRT2Q8IXJ6 389 aa21.36■■□□□ 1.01
LMX1B-203ENST00000526117 SMC1BQ8NDV3 1235 aa21.36■■□□□ 1.01
LMX1B-203ENST00000526117 H7C1D1 291 aa21.35■■□□□ 1.01
LMX1B-203ENST00000526117 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
LMX1B-203ENST00000526117 VPS37DQ86XT2 251 aa21.35■■□□□ 1.01
LMX1B-203ENST00000526117 MICALL2Q8IY33 904 aa21.35■■□□□ 1.01
LMX1B-203ENST00000526117 SURF6O75683 361 aaKnown RBP21.34■■□□□ 1.01
LMX1B-203ENST00000526117 GTF2IP78347 998 aa21.34■■□□□ 1.01
LMX1B-203ENST00000526117 ZC3H15Q8WU90 426 aaKnown RBP21.34■■□□□ 1.01
LMX1B-203ENST00000526117 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
LMX1B-203ENST00000526117 ERC1Q8IUD2 1116 aa21.33■■□□□ 1.01
LMX1B-203ENST00000526117 PGAP2Q9UHJ9 254 aa21.33■■□□□ 1.01
LMX1B-203ENST00000526117 PDS5AQ29RF7 1337 aaKnown RBP21.32■■□□□ 1
LMX1B-203ENST00000526117 A0A1B0GUL7 405 aa21.32■■□□□ 1
LMX1B-203ENST00000526117 SEMA3EO15041 775 aa21.32■■□□□ 1
LMX1B-203ENST00000526117 USP17L8P0C7I0 530 aa21.32■■□□□ 1
LMX1B-203ENST00000526117 BCAMP50895 628 aa21.32■■□□□ 1
LMX1B-203ENST00000526117 POTEIP0CG38 1075 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms