RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 CSF1RP07333 972 aa12.06□□□□□ -0.48
SDC2-207ENST00000522911 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
SDC2-207ENST00000522911 NOM1Q5C9Z4 860 aaKnown RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
SDC2-207ENST00000522911 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
SDC2-207ENST00000522911 GREM2Q9H772 168 aa12.06□□□□□ -0.48
SDC2-207ENST00000522911 POLR2AP24928 1970 aaKnown RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
SDC2-207ENST00000522911 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
SDC2-207ENST00000522911 CASP7P55210 303 aa12.05□□□□□ -0.48
SDC2-207ENST00000522911 TWISTNBQ3B726 338 aaPredicted RBP12.05□□□□□ -0.48
SDC2-207ENST00000522911 C15orf52Q6ZUT6 534 aaKnown RBP12.05□□□□□ -0.48
SDC2-207ENST00000522911 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
SDC2-207ENST00000522911 RNF186Q9NXI6 227 aa12.05□□□□□ -0.48
SDC2-207ENST00000522911 MYH3P11055 1940 aa12.05□□□□□ -0.48
SDC2-207ENST00000522911 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
SDC2-207ENST00000522911 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 DGKZQ13574 1117 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 GCKRQ14397 625 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
SDC2-207ENST00000522911 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 ANKRD2Q9GZV1 360 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 CASP8AP2Q9UKL3 1982 aa12.04□□□□□ -0.48
SDC2-207ENST00000522911 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
SDC2-207ENST00000522911 WNT10BO00744 389 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 SLC34A2O95436 690 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
SDC2-207ENST00000522911 FLIIQ13045 1269 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 CWF19L2Q2TBE0 894 aaKnown RBP12.03□□□□□ -0.48
SDC2-207ENST00000522911 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
SDC2-207ENST00000522911 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
SDC2-207ENST00000522911 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.49
SDC2-207ENST00000522911 UNCXA6NJT0 531 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 TRPA1O75762 1119 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 ITGA6P23229 1130 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 TM4SF4P48230 202 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 NBPF9Q3BBW0 867 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 G2E3Q7L622 706 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
SDC2-207ENST00000522911 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
SDC2-207ENST00000522911 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
SDC2-207ENST00000522911 FKBP1AP62942 108 aaKnown RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 TXNRD3Q86VQ6 643 aa12.01□□□□□ -0.49
SDC2-207ENST00000522911 APOBEC3FQ8IUX4 373 aaKnown RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
SDC2-207ENST00000522911 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
SDC2-207ENST00000522911 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
SDC2-207ENST00000522911 NF2P35240 595 aa12□□□□□ -0.49
SDC2-207ENST00000522911 MAP3K11Q16584 847 aa12□□□□□ -0.49
SDC2-207ENST00000522911 LDLRAD1Q5T700 205 aa12□□□□□ -0.49
SDC2-207ENST00000522911 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
SDC2-207ENST00000522911 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
SDC2-207ENST00000522911 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
SDC2-207ENST00000522911 HTTP42858 3142 aa11.99□□□□□ -0.49
SDC2-207ENST00000522911 VAMP4O75379 141 aa11.99□□□□□ -0.49
SDC2-207ENST00000522911 CHRNDQ07001 517 aa11.99□□□□□ -0.49
SDC2-207ENST00000522911 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
SDC2-207ENST00000522911 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
SDC2-207ENST00000522911 IL1R1P14778 569 aa11.98□□□□□ -0.49
SDC2-207ENST00000522911 FOXO4P98177 505 aa11.98□□□□□ -0.49
SDC2-207ENST00000522911 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
SDC2-207ENST00000522911 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
SDC2-207ENST00000522911 CCDC184Q52MB2 194 aa11.98□□□□□ -0.49
SDC2-207ENST00000522911 CD209Q9NNX6 404 aa11.98□□□□□ -0.49
SDC2-207ENST00000522911 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
SDC2-207ENST00000522911 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
SDC2-207ENST00000522911 INHBEP58166 350 aa11.97□□□□□ -0.49
SDC2-207ENST00000522911 BEND3Q5T5X7 828 aa11.97□□□□□ -0.49
SDC2-207ENST00000522911 ARMC9Q7Z3E5 817 aa11.97□□□□□ -0.49
SDC2-207ENST00000522911 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
SDC2-207ENST00000522911 KLRK1P26718 216 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 GTF2IP78347 998 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
SDC2-207ENST00000522911 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 MXD3Q9BW11 206 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 LAMB1P07942 1786 aa11.96□□□□□ -0.49
SDC2-207ENST00000522911 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 PTPN12Q05209 780 aaKnown RBP11.95□□□□□ -0.5
SDC2-207ENST00000522911 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 ZNF804AQ7Z570 1209 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms