RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 NLRP13Q86W25 1043 aa7.16□□□□□ -1.26
SKP1-210ENST00000522855 FMR1NBQ8N0W7 255 aaPredicted RBP7.16□□□□□ -1.26
SKP1-210ENST00000522855 Q8N3U1 123 aa7.16□□□□□ -1.26
SKP1-210ENST00000522855 MRRFQ96E11 262 aaKnown RBP7.16□□□□□ -1.26
SKP1-210ENST00000522855 CSRNP1Q96S65 589 aa7.16□□□□□ -1.26
SKP1-210ENST00000522855 ELP3Q9H9T3 547 aa7.16□□□□□ -1.26
SKP1-210ENST00000522855 A6NHS1 94 aa7.15□□□□□ -1.26
SKP1-210ENST00000522855 EIF1AYO14602 144 aaKnown RBP7.15□□□□□ -1.26
SKP1-210ENST00000522855 HOXD8P13378 290 aaPredicted RBP7.15□□□□□ -1.26
SKP1-210ENST00000522855 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
SKP1-210ENST00000522855 PERM1Q5SV97 790 aa7.15□□□□□ -1.26
SKP1-210ENST00000522855 SEMA6BQ9H3T3 888 aa7.15□□□□□ -1.26
SKP1-210ENST00000522855 IGFLR1Q9H665 355 aa7.15□□□□□ -1.26
SKP1-210ENST00000522855 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.26
SKP1-210ENST00000522855 DYRK3O43781 588 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 VAMP1P23763 118 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 TARSP26639 723 aaKnown RBP7.14□□□□□ -1.27
SKP1-210ENST00000522855 ORC1Q13415 861 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 FOXD4L6Q3SYB3 417 aaPredicted RBP7.14□□□□□ -1.27
SKP1-210ENST00000522855 TRAPPC3LQ5T215 181 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 TTC39BQ5VTQ0 682 aaPredicted RBP7.14□□□□□ -1.27
SKP1-210ENST00000522855 FOXD4L3Q6VB84 417 aaPredicted RBP7.14□□□□□ -1.27
SKP1-210ENST00000522855 KRT25Q7Z3Z0 450 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 FAM35AQ86V20 835 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 TTC9Q92623 222 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 PMEPA1Q969W9 287 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 MRS2Q9HD23 443 aa7.14□□□□□ -1.27
SKP1-210ENST00000522855 UNCXA6NJT0 531 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 C9orf172C9J069 976 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 SASH3O75995 380 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 RARAP10276 462 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 NRLP54845 237 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 PCSK7Q16549 785 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 MSL1Q68DK7 614 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 SHISA2Q6UWI4 295 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 LENG1Q96BZ8 264 aaPredicted RBP7.13□□□□□ -1.27
SKP1-210ENST00000522855 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 SSBP4Q9BWG4 385 aaPredicted RBP7.13□□□□□ -1.27
SKP1-210ENST00000522855 TMEM63CQ9P1W3 806 aa7.13□□□□□ -1.27
SKP1-210ENST00000522855 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
SKP1-210ENST00000522855 RGS9O75916 674 aaPredicted RBP7.12□□□□□ -1.27
SKP1-210ENST00000522855 CPB1P15086 417 aa7.12□□□□□ -1.27
SKP1-210ENST00000522855 RAC1P63000 192 aa7.12□□□□□ -1.27
SKP1-210ENST00000522855 DTWD1Q8N5C7 304 aa7.12□□□□□ -1.27
SKP1-210ENST00000522855 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
SKP1-210ENST00000522855 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
SKP1-210ENST00000522855 GNA15P30679 374 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
SKP1-210ENST00000522855 MLLT1Q03111 559 aaPredicted RBP7.11□□□□□ -1.27
SKP1-210ENST00000522855 PSMD2Q13200 908 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 TXNRD3Q86VQ6 643 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
SKP1-210ENST00000522855 ZFYVE28Q9HCC9 887 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 TLR7Q9NYK1 1049 aaKnown RBP7.11□□□□□ -1.27
SKP1-210ENST00000522855 PARP2Q9UGN5 583 aa7.11□□□□□ -1.27
SKP1-210ENST00000522855 SORBS3O60504 671 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 PSAPP07602 524 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 CES1P23141 567 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 SOX18P35713 384 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 FBXO11Q86XK2 927 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 KIAA1522Q9P206 1035 aaPredicted RBP7.1□□□□□ -1.27
SKP1-210ENST00000522855 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
SKP1-210ENST00000522855 GIPC1O14908 333 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 MMP20O60882 483 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
SKP1-210ENST00000522855 EDN3P14138 238 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 DAB2P98082 770 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.27
SKP1-210ENST00000522855 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 CCDC74AQ96AQ1 378 aa7.09□□□□□ -1.27
SKP1-210ENST00000522855 H2AFB1P0C5Y9 115 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 H2AFB2P0C5Z0 115 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 ELMSAN1Q6PJG2 1045 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 C1orf127Q8N9H9 656 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 SMG9Q9H0W8 520 aaKnown RBP7.08□□□□□ -1.28
SKP1-210ENST00000522855 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 VTI1BQ9UEU0 232 aa7.08□□□□□ -1.28
SKP1-210ENST00000522855 MRPL58Q14197 206 aaKnown RBP7.07□□□□□ -1.28
SKP1-210ENST00000522855 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 SETDB2Q96T68 719 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 SRCIN1Q9C0H9 1055 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
SKP1-210ENST00000522855 EREGO14944 169 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 RECKO95980 971 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 TCF3P15923 654 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
SKP1-210ENST00000522855 HYAL2Q12891 473 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 TSNAXIP1Q2TAA8 658 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
SKP1-210ENST00000522855 PRSS36Q5K4E3 855 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 ZMYM1Q5SVZ6 1142 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 WFDC8Q8IUA0 241 aa7.06□□□□□ -1.28
SKP1-210ENST00000522855 LOC102724428A0A0B4J2F2 783 aa7.05□□□□□ -1.28
SKP1-210ENST00000522855 DLL1O00548 723 aa7.05□□□□□ -1.28
SKP1-210ENST00000522855 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms