RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FOSP01100 380 aaPredicted RBP5.2□□□□□ -1.58
SKP1-209ENST00000522552 ATF3P18847 181 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 CD53P19397 219 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 PMLP29590 882 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 GBP2P32456 591 aaPredicted RBP5.2□□□□□ -1.58
SKP1-209ENST00000522552 STAT3P40763 770 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 SKOR1P84550 965 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 MCL1Q07820 350 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 DGKZQ13574 1117 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 PWP1Q13610 501 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 WDR78Q5VTH9 848 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 CCDC81Q6ZN84 652 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 RELL1Q8IUW5 271 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 FAM169BQ8N8A8 192 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 JMYQ8N9B5 988 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 THAP3Q8WTV1 239 aaPredicted RBP5.2□□□□□ -1.58
SKP1-209ENST00000522552 CHAC2Q8WUX2 184 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 NAP1L4Q99733 375 aaKnown RBP5.2□□□□□ -1.58
SKP1-209ENST00000522552 TRIM56Q9BRZ2 755 aaKnown RBP5.2□□□□□ -1.58
SKP1-209ENST00000522552 NT5C1AQ9BXI3 368 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 RBSNQ9H1K0 784 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 OSBPL3Q9H4L5 887 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 ENAMQ9NRM1 1142 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 PKD2L1Q9P0L9 805 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 SWAP70Q9UH65 585 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 PTCH2Q9Y6C5 1203 aa5.2□□□□□ -1.58
SKP1-209ENST00000522552 ERVK-9P63128 1117 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 POU5F1BQ06416 359 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 C11orf91Q3C1V1 193 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 C10orf62Q5T681 223 aaPredicted RBP5.19□□□□□ -1.58
SKP1-209ENST00000522552 FBXL19Q6PCT2 694 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 POTEAQ6S8J7 498 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 MYO1HQ8N1T3 1032 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 TMEM74Q96NL1 305 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 BCO2Q9BYV7 579 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 ZNF700Q9H0M5 742 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 KLK14Q9P0G3 267 aa5.19□□□□□ -1.58
SKP1-209ENST00000522552 FOXD3Q9UJU5 478 aaPredicted RBP5.19□□□□□ -1.58
SKP1-209ENST00000522552 A6NJY4 79 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 POTECB2RU33 542 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 EXOC5O00471 708 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 NRDCO43847 1150 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 GDF9O60383 454 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 CDC27P30260 824 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 NFKB2Q00653 900 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 HLTFQ14527 1009 aaKnown RBP eCLIP5.18□□□□□ -1.58
SKP1-209ENST00000522552 MTERF2Q49AM1 385 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 TM4SF20Q53R12 229 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 C1orf53Q5VUE5 145 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 SYNPOQ8N3V7 929 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 TTC16Q8NEE8 873 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 IFT43Q96FT9 208 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MRGPRX2Q96LB1 330 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 C1QTNF2Q9BXJ5 285 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 TMX4Q9H1E5 349 aaPredicted RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 ESF1Q9H501 851 aaKnown RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 NPHS2Q9NP85 383 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 KCNQ5Q9NR82 932 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MAP3K20Q9NYL2 800 aaKnown RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 UBP1Q9NZI7 540 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MCM8Q9UJA3 840 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 ERVH48-1M5A8F1 160 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 LCE2BO14633 110 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 DIAPH1O60610 1272 aaKnown RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 TNFRSF21O75509 655 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MYCLP1P12525 358 aaPredicted RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 RAB27AP51159 221 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 SH3BP2P78314 561 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MAP3K10Q02779 954 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 SEPT6Q14141 434 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MTFR1Q15390 333 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 RC3H1Q5TC82 1133 aaKnown RBP5.18□□□□□ -1.58
SKP1-209ENST00000522552 TTC8Q8TAM2 541 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 PPM1EQ8WY54 764 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 MFSD3Q96ES6 412 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 CAAP1Q9H8G2 361 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 ACTR10Q9NZ32 417 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 PFDN2Q9UHV9 154 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 PPT2Q9UMR5 302 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 USP3Q9Y6I4 520 aa5.18□□□□□ -1.58
SKP1-209ENST00000522552 KDM2BQ8NHM5 1336 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 RASGRP1O95267 797 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 FAM160A1Q05DH4 1040 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 CCDC85BQ15834 202 aaPredicted RBP5.17□□□□□ -1.58
SKP1-209ENST00000522552 RTN1Q16799 776 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 CT47A1Q5JQC4 288 aaPredicted RBP5.17□□□□□ -1.58
SKP1-209ENST00000522552 AXDND1Q5T1B0 1012 aaPredicted RBP5.17□□□□□ -1.58
SKP1-209ENST00000522552 SH3PXD2AQ5TCZ1 1133 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 PCGF5Q86SE9 256 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 ZNF511Q8NB15 262 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 EHBP1Q8NDI1 1231 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 RHOVQ96L33 236 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 KCTD15Q96SI1 283 aaPredicted RBP5.17□□□□□ -1.58
SKP1-209ENST00000522552 CASS4Q9NQ75 786 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 CDV3Q9UKY7 258 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms