RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 RELL1Q8IUW5 271 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 GTPBP3Q969Y2 492 aaKnown RBP8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 GPRASP2Q96D09 838 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 TRERF1Q96PN7 1200 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 AKAP2Q9Y2D5 859 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 NFKBIEO00221 500 aa8.15□□□□□ -1.1
HMGB1P46-201ENST00000520062 PAK2Q13177 524 aa8.15□□□□□ -1.1
HMGB1P46-201ENST00000520062 TMEM74Q96NL1 305 aa8.15□□□□□ -1.1
HMGB1P46-201ENST00000520062 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
HMGB1P46-201ENST00000520062 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 FGRP09769 529 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 ACPPP15309 386 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 GRIA4P48058 902 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 SIK1P57059 783 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 RAB44Q7Z6P3 723 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 KIAA0825Q8IV33 1275 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 SPON2Q9BUD6 331 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 AVENQ9NQS1 362 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 KCNQ5Q9NR82 932 aa8.14□□□□□ -1.11
HMGB1P46-201ENST00000520062 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 RBL2Q08999 1139 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 SOGA3Q5TF21 947 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 SEC16BQ96JE7 1060 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 RHOVQ96L33 236 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 HIRIP3Q9BW71 556 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 PBX4Q9BYU1 374 aa8.13□□□□□ -1.11
HMGB1P46-201ENST00000520062 A0A096LPE4 126 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 A0A1W2PPZ6 126 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 PDE2AO00408 941 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 SIN3BO75182 1162 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 GBP2P32456 591 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 RBSNQ9H1K0 784 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 ADAMTS1Q9UHI8 967 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 PRR12Q9ULL5 1215 aa8.12□□□□□ -1.11
HMGB1P46-201ENST00000520062 GHRHP01286 108 aa8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 CANXP27824 592 aaKnown RBP8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 LIG3P49916 1009 aa8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 NECAB3Q96P71 396 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 DNAJC2Q99543 621 aaKnown RBP8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 TRIM56Q9BRZ2 755 aaKnown RBP8.11□□□□□ -1.11
HMGB1P46-201ENST00000520062 FBXO24O75426 580 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 CTBSQ01459 385 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 COL9A2Q14055 689 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 SPRED3Q2MJR0 410 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 SYT9Q86SS6 491 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 TNFRSF25Q93038 417 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 NT5C1AQ9BXI3 368 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
HMGB1P46-201ENST00000520062 METTL12A8MUP2 240 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 ENC1O14682 589 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 PPFIA3O75145 1194 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 TRPA1O75762 1119 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 CELA3AP09093 270 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 LMNB2Q03252 620 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 SV2AQ7L0J3 742 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 UBE2OQ9C0C9 1292 aaKnown RBP8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 LNPKQ9C0E8 428 aa8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 GMPR2Q9P2T1 348 aaKnown RBP8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.11
HMGB1P46-201ENST00000520062 MINDY4BA8MYZ0 360 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 J3QW42 95 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 ATP11AP98196 1134 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 MLLT1Q03111 559 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 NOP9Q86U38 636 aaKnown RBP8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 STRIP2Q9ULQ0 834 aa8.08□□□□□ -1.12
HMGB1P46-201ENST00000520062 CDC14CA4D256 554 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 GREM1O60565 184 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 BMP4P12644 408 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 GARTP22102 1010 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 PPP2R3AQ06190 1150 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 TTBK2Q6IQ55 1244 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 FBXL19Q6PCT2 694 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 CCDC84Q86UT8 332 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 FAM177A1Q8N128 213 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms