RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NUDCQ9Y266 331 aa5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 TTC36A6NLP5 189 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 VGLL3A8MV65 326 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 KIF1CO43896 1103 aaKnown RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 RBM25P49756 843 aaKnown RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 RIPK4P57078 832 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 SRPK2P78362 688 aaKnown RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 GRIK5Q16478 980 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 CASC1Q6TDU7 716 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 ZNF771Q7L3S4 317 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 TXNRD3Q86VQ6 643 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 PBXIP1Q96AQ6 731 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 PPP1R9BQ96SB3 815 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 MYCBPQ99417 103 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 CARD10Q9BWT7 1032 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 RAI14Q9P0K7 980 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 SMARCA2P51531 1590 aa5.92□□□□□ -1.46
HMGB1P19-201ENST00000517578 CUX2O14529 1486 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 CEP164Q9UPV0 1460 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 UQCRHLA0A096LP55 91 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 SCO2A0A1W2PP80 73 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 UQCRHP07919 91 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 H2AFB1P0C5Y9 115 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 H2AFB2P0C5Z0 115 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 IGFBP4P22692 258 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 INPP5BP32019 993 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 RAC1P63000 192 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 NBPF11Q86T75 865 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 DMRTC2Q8IXT2 367 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 STK32AQ8WU08 396 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 LPIN3Q9BQK8 851 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 SSBP4Q9BWG4 385 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 UPF2Q9HAU5 1272 aaKnown RBP5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 ZFATQ9P243 1243 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 ZMIZ1Q9ULJ6 1067 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 CCDC144AA2RUR9 1427 aa5.91□□□□□ -1.46
HMGB1P19-201ENST00000517578 PEG3Q9GZU2 1588 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 ZBTB42B2RXF5 422 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 RGS9O75916 674 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 ATG7O95352 703 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 IDH3AP50213 366 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 SATB1Q01826 763 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 NRG1Q02297 640 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 PLAURQ03405 335 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 VTI1AQ96AJ9 217 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 CGNQ9P2M7 1197 aaKnown RBP5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 KNSTRNQ9Y448 316 aa5.9□□□□□ -1.46
HMGB1P19-201ENST00000517578 GOLGA6L6A8MZA4 724 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 GOLGA6L22H0YM25 854 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 PRMT3O60678 531 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 MAP3K6O95382 1288 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 CPB1P15086 417 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 KCNJ4P48050 445 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 MSL1Q68DK7 614 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 DHX32Q7L7V1 743 aaKnown RBP5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 FAM35AQ86V20 835 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 TRPM4Q8TD43 1214 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 ZFP64Q9NPA5 681 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 PRDM10Q9NQV6 1147 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 POGKQ9P215 609 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 KCNG1Q9UIX4 513 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 R3HCC1Q9Y3T6 440 aaKnown RBP5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 CEP83Q9Y592 693 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 CFAP65Q6ZU64 1925 aaKnown RBP5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 SCAPERQ9BY12 1400 aa5.89□□□□□ -1.47
HMGB1P19-201ENST00000517578 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 TULP2O00295 520 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 MAFGO15525 162 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 EPB42P16452 691 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 WEE1P30291 646 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 DGKZQ13574 1117 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 NBPF9Q3BBW0 867 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 PERM1Q5SV97 790 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 TMEM164Q5U3C3 297 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 KRT25Q7Z3Z0 450 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 EGFL6Q8IUX8 553 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 GPATCH11Q8N954 259 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 TP53INP1Q96A56 240 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 NCAPGQ9BPX3 1015 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 SMC4Q9NTJ3 1288 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 TERF2IPQ9NYB0 399 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 OGFRQ9NZT2 677 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 USP21Q9UK80 565 aa5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 NOL7Q9UMY1 257 aaKnown RBP5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 IBTKQ9P2D0 1353 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P19-201ENST00000517578 RB1CC1Q8TDY2 1594 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms