RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 TRPM4Q8TD43 1214 aa30.96■■■□□ 2.55
PVT1-204ENST00000517525 SHTN1A0MZ66 631 aa30.95■■■□□ 2.55
PVT1-204ENST00000517525 IPO8O15397 1037 aaKnown RBP30.95■■■□□ 2.55
PVT1-204ENST00000517525 KCNJ4P48050 445 aa30.95■■■□□ 2.55
PVT1-204ENST00000517525 ZNF280AP59817 542 aaPredicted RBP30.95■■■□□ 2.55
PVT1-204ENST00000517525 CNNM1Q9NRU3 951 aa30.95■■■□□ 2.55
PVT1-204ENST00000517525 TMEM88BA6NKF7 163 aa30.94■■■□□ 2.54
PVT1-204ENST00000517525 STRIP1Q5VSL9 837 aa30.94■■■□□ 2.54
PVT1-204ENST00000517525 INTS3Q68E01 1043 aaKnown RBP30.94■■■□□ 2.54
PVT1-204ENST00000517525 HDAC5Q9UQL6 1122 aa30.94■■■□□ 2.54
PVT1-204ENST00000517525 RIPOR2Q9Y4F9 1068 aa30.94■■■□□ 2.54
PVT1-204ENST00000517525 PSME4Q14997 1843 aa30.94■■■□□ 2.54
PVT1-204ENST00000517525 TAF5LO75529 589 aa30.93■■■□□ 2.54
PVT1-204ENST00000517525 KLRK1P26718 216 aa30.93■■■□□ 2.54
PVT1-204ENST00000517525 MMP14P50281 582 aa30.92■■■□□ 2.54
PVT1-204ENST00000517525 DACT2Q5SW24 774 aa30.92■■■□□ 2.54
PVT1-204ENST00000517525 HELBQ8NG08 1087 aaPredicted RBP30.92■■■□□ 2.54
PVT1-204ENST00000517525 UBE4AQ14139 1066 aa30.91■■■□□ 2.54
PVT1-204ENST00000517525 SAMD7Q7Z3H4 446 aa30.91■■■□□ 2.54
PVT1-204ENST00000517525 MROH5Q6ZUA9 1318 aa30.91■■■□□ 2.54
PVT1-204ENST00000517525 CD209Q9NNX6 404 aa30.9■■■□□ 2.54
PVT1-204ENST00000517525 MYO3BQ8WXR4 1341 aa30.9■■■□□ 2.54
PVT1-204ENST00000517525 SNAP23O00161 211 aa30.89■■■□□ 2.54
PVT1-204ENST00000517525 UBTFL1P0CB47 393 aaPredicted RBP30.89■■■□□ 2.54
PVT1-204ENST00000517525 PUS3Q9BZE2 481 aaKnown RBP30.89■■■□□ 2.54
PVT1-204ENST00000517525 BCAR3O75815 825 aa30.88■■■□□ 2.53
PVT1-204ENST00000517525 USP17L8P0C7I0 530 aa30.88■■■□□ 2.53
PVT1-204ENST00000517525 ATF7IPQ6VMQ6 1270 aa30.88■■■□□ 2.53
PVT1-204ENST00000517525 CDC37L1Q7L3B6 337 aa30.88■■■□□ 2.53
PVT1-204ENST00000517525 EGFRP00533 1210 aa30.87■■■□□ 2.53
PVT1-204ENST00000517525 TRIM27P14373 513 aa30.87■■■□□ 2.53
PVT1-204ENST00000517525 IL1R1P14778 569 aa30.87■■■□□ 2.53
PVT1-204ENST00000517525 RFX5P48382 616 aaPredicted RBP30.87■■■□□ 2.53
PVT1-204ENST00000517525 TBC1D10BQ4KMP7 808 aaPredicted RBP30.87■■■□□ 2.53
PVT1-204ENST00000517525 A0A1B0GUL6 1792 aa30.87■■■□□ 2.53
PVT1-204ENST00000517525 KIF4BQ2VIQ3 1234 aa30.86■■■□□ 2.53
PVT1-204ENST00000517525 TTLL5Q6EMB2 1281 aa30.86■■■□□ 2.53
PVT1-204ENST00000517525 ZNF804AQ7Z570 1209 aa30.86■■■□□ 2.53
PVT1-204ENST00000517525 FBXO3Q9UK99 471 aa30.85■■■□□ 2.53
PVT1-204ENST00000517525 CNTNAP1P78357 1384 aa30.84■■■□□ 2.53
PVT1-204ENST00000517525 VGLL2Q8N8G2 317 aa30.84■■■□□ 2.53
PVT1-204ENST00000517525 TRAF5O00463 557 aa30.83■■■□□ 2.53
PVT1-204ENST00000517525 PLIN1O60240 522 aa30.83■■■□□ 2.53
PVT1-204ENST00000517525 GNAI3P08754 354 aa30.83■■■□□ 2.53
PVT1-204ENST00000517525 LRRC24Q50LG9 513 aa30.83■■■□□ 2.53
PVT1-204ENST00000517525 CST9Q5W186 159 aa30.83■■■□□ 2.53
PVT1-204ENST00000517525 GLIS2Q9BZE0 524 aaPredicted RBP30.83■■■□□ 2.53
PVT1-204ENST00000517525 RASSF10A6NK89 507 aa30.82■■■□□ 2.52
PVT1-204ENST00000517525 FKBP1AP62942 108 aaKnown RBP30.82■■■□□ 2.52
PVT1-204ENST00000517525 PTPN12Q05209 780 aaKnown RBP30.82■■■□□ 2.52
PVT1-204ENST00000517525 MEIS3Q99687 375 aa30.82■■■□□ 2.52
PVT1-204ENST00000517525 MYOZ2Q9NPC6 264 aa30.82■■■□□ 2.52
PVT1-204ENST00000517525 ZNF646O15015 1829 aaPredicted RBP30.82■■■□□ 2.52
PVT1-204ENST00000517525 PDE8BO95263 885 aa30.81■■■□□ 2.52
PVT1-204ENST00000517525 GTF2IP78347 998 aa30.81■■■□□ 2.52
PVT1-204ENST00000517525 RBM26Q5T8P6 1007 aaKnown RBP30.81■■■□□ 2.52
PVT1-204ENST00000517525 ZKSCAN2Q63HK3 967 aa30.81■■■□□ 2.52
PVT1-204ENST00000517525 EYA2O00167 538 aa30.8■■■□□ 2.52
PVT1-204ENST00000517525 FMR1Q06787 632 aaKnown RBP eCLIP30.8■■■□□ 2.52
PVT1-204ENST00000517525 OGFOD1Q8N543 542 aa30.8■■■□□ 2.52
PVT1-204ENST00000517525 FRAT1Q92837 279 aaPredicted RBP30.8■■■□□ 2.52
PVT1-204ENST00000517525 LRRFIP2Q9Y608 721 aaKnown RBP30.8■■■□□ 2.52
PVT1-204ENST00000517525 SASH1O94885 1247 aa30.79■■■□□ 2.52
PVT1-204ENST00000517525 METTL24Q5JXM2 366 aa30.79■■■□□ 2.52
PVT1-204ENST00000517525 TDRD7Q8NHU6 1098 aaKnown RBP30.79■■■□□ 2.52
PVT1-204ENST00000517525 KLHDC4Q8TBB5 520 aa30.79■■■□□ 2.52
PVT1-204ENST00000517525 DCPSQ96C86 337 aaKnown RBP30.79■■■□□ 2.52
PVT1-204ENST00000517525 FAM84BQ96KN1 310 aaPredicted RBP30.79■■■□□ 2.52
PVT1-204ENST00000517525 MXD3Q9BW11 206 aa30.79■■■□□ 2.52
PVT1-204ENST00000517525 MKRN1Q9UHC7 482 aaKnown RBP30.78■■■□□ 2.52
PVT1-204ENST00000517525 FAM205AQ6ZU69 1335 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 PITPNM2Q9BZ72 1349 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 CIAO1O76071 339 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 HIBADHP31937 336 aaKnown RBP30.77■■■□□ 2.52
PVT1-204ENST00000517525 MTX1Q13505 466 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 SCARF1Q14162 830 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 KRT26Q7Z3Y9 468 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 FBXO33Q7Z6M2 555 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 USP48Q86UV5 1035 aa30.77■■■□□ 2.52
PVT1-204ENST00000517525 DEFB115Q30KQ5 88 aa30.76■■■□□ 2.51
PVT1-204ENST00000517525 FBXW7Q969H0 707 aa30.76■■■□□ 2.51
PVT1-204ENST00000517525 TLL2Q9Y6L7 1015 aa30.76■■■□□ 2.51
PVT1-204ENST00000517525 TRPM7Q96QT4 1865 aa30.76■■■□□ 2.51
PVT1-204ENST00000517525 CELF2O95319 508 aaKnown RBP30.75■■■□□ 2.51
PVT1-204ENST00000517525 FGFR2P21802 821 aa30.75■■■□□ 2.51
PVT1-204ENST00000517525 ATG9AQ7Z3C6 839 aa30.75■■■□□ 2.51
PVT1-204ENST00000517525 COPRSQ9NQ92 184 aa30.75■■■□□ 2.51
PVT1-204ENST00000517525 GGA3Q9NZ52 723 aa30.75■■■□□ 2.51
PVT1-204ENST00000517525 TNNQ9UQP3 1299 aa30.75■■■□□ 2.51
PVT1-204ENST00000517525 CERS5Q8N5B7 392 aa30.74■■■□□ 2.51
PVT1-204ENST00000517525 ZBED3Q96IU2 234 aaPredicted RBP30.74■■■□□ 2.51
PVT1-204ENST00000517525 HHIPL1Q96JK4 782 aa30.74■■■□□ 2.51
PVT1-204ENST00000517525 HDAC9Q9UKV0 1011 aa30.74■■■□□ 2.51
PVT1-204ENST00000517525 GYG1P46976 350 aa30.73■■■□□ 2.51
PVT1-204ENST00000517525 PUM3Q15397 648 aaKnown RBP30.73■■■□□ 2.51
PVT1-204ENST00000517525 SULF1Q8IWU6 871 aa30.73■■■□□ 2.51
PVT1-204ENST00000517525 ABT1Q9ULW3 272 aaKnown RBP30.73■■■□□ 2.51
PVT1-204ENST00000517525 VEGFBP49765 207 aa30.72■■■□□ 2.51
PVT1-204ENST00000517525 MTMR14Q8NCE2 650 aa30.72■■■□□ 2.51
PVT1-204ENST00000517525 ASTN2O75129 1339 aaPredicted RBP30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms