RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 HSPD1P10809 573 aaKnown RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 SYCP1Q15431 976 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 STX1AQ16623 288 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 NBPF14Q5TI25 921 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 SMAP1Q8IYB5 467 aaPredicted RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 DNAJC25Q9H1X3 360 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 CHMP3Q9Y3E7 222 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 MAST3O60307 1309 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 E7EWF7 191 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 ATP5J2-PTCD1G3V325 749 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 CCDC186Q7Z3E2 898 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 PROSER2Q86WR7 435 aaPredicted RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 ZNF396Q96N95 335 aaPredicted RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 ABCA3Q99758 1704 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 BCL2L12Q9HB09 334 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 CWC25Q9NXE8 425 aaPredicted RBP7.83□□□□□ -1.16
CDH12-203ENST00000517378 FBXO3Q9UK99 471 aa7.83□□□□□ -1.16
CDH12-203ENST00000517378 TOGARAM1Q9Y4F4 1720 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 EYA2O00167 538 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 GOLIM4O00461 696 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 RNF113AO15541 343 aaKnown RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 NEMFO60524 1076 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 PDIA3P30101 505 aaKnown RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 CABP4P57796 275 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 FAM160A1Q05DH4 1040 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 ILDR1Q86SU0 546 aaPredicted RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 CCDC191Q8NCU4 936 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 JARID2Q92833 1246 aaPredicted RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 TRIM5Q9C035 493 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 GOLPH3LQ9H4A5 285 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 KCND1Q9NSA2 647 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 WDR19Q8NEZ3 1342 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 RBM6P78332 1123 aaKnown RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 APOBRQ0VD83 1088 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 C11orf57Q6ZUT1 292 aaPredicted RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 CCAR1Q8IX12 1150 aaKnown RBP7.82□□□□□ -1.16
CDH12-203ENST00000517378 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
CDH12-203ENST00000517378 ATRNO75882 1429 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 ECM29Q5VYK3 1845 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 ARAP2Q8WZ64 1704 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 A0A1W2PQ27 194 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 A0A1W2PQ64 194 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 A0A1W2PQD8 194 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 USP28Q96RU2 1077 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 LRRC2Q9BYS8 371 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 RTEL1Q9NZ71 1219 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 CLIP2Q9UDT6 1046 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 SPATA31A3Q5VYP0 1347 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 SMTNL1A8MU46 457 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 ERVV-2B6SEH9 535 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 FOXP2O15409 715 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 NKX1-1Q15270 411 aaPredicted RBP7.81□□□□□ -1.16
CDH12-203ENST00000517378 CCDC73Q6ZRK6 1079 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 DHX40Q8IX18 779 aaKnown RBP7.81□□□□□ -1.16
CDH12-203ENST00000517378 NRBP1Q9UHY1 535 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 ANKRD36CQ5JPF3 1778 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
CDH12-203ENST00000517378 XIRP1Q702N8 1843 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 A0A1B0GUL7 405 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 M0R2C6 588 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 ZFYP08048 801 aaPredicted RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 FDPSP14324 419 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 FGD1P98174 961 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 LRMPQ12912 555 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 LRRFIP1Q32MZ4 808 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 CCDC144BQ3MJ40 725 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 CCDC144CPQ8IYA2 1237 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 FMR1NBQ8N0W7 255 aaPredicted RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 BPIFA3Q9BQP9 254 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 ANO10Q9NW15 660 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 PAXBP1Q9Y5B6 917 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 LRP5O75197 1615 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 NEDD4P46934 1319 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 GOLGA6L19H0YKK7 550 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 IFIT1P09914 478 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 CSB-PGBD3P0DP91 1061 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 LRRC8AQ8IWT6 810 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 FTOQ9C0B1 505 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDH12-203ENST00000517378 POLR3EQ9NVU0 708 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 CTNNA3Q9UI47 895 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 MYH3P11055 1940 aa7.8□□□□□ -1.16
CDH12-203ENST00000517378 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.8□□□□□ -1.16
CDH12-203ENST00000517378 COL5A2P05997 1499 aaPredicted RBP7.79□□□□□ -1.16
CDH12-203ENST00000517378 A0A0G2JLW4 131 aa7.79□□□□□ -1.16
CDH12-203ENST00000517378 KINO60870 393 aaKnown RBP7.79□□□□□ -1.16
CDH12-203ENST00000517378 YEATS4O95619 227 aa7.79□□□□□ -1.16
CDH12-203ENST00000517378 TIMM10P62072 90 aa7.79□□□□□ -1.16
CDH12-203ENST00000517378 LRRC24Q50LG9 513 aa7.79□□□□□ -1.16
CDH12-203ENST00000517378 ADALQ6DHV7 355 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms