RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NPC1L1Q9UHC9 1359 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 RSPO4Q2I0M5 234 aaPredicted RBP4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 SPRYD7Q5W111 196 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 SUGP1Q8IWZ8 645 aaKnown RBP4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ANKLE1Q8NAG6 615 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 KCNH5Q8NCM2 988 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 RAET1EQ8TD07 263 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 MASTLQ96GX5 879 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ASAP1Q9ULH1 1129 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ZMIZ1Q9ULJ6 1067 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ANKRD50Q9ULJ7 1429 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 FRYQ5TBA9 3013 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 KMT2EQ8IZD2 1858 aa4.96□□□□□ -1.61
SCARNA13-201ENST00000516672 SBNO2Q9Y2G9 1366 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 H7C1D1 291 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 ZPR1O75312 459 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 GNRH1P01148 92 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 SRGNP10124 158 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 TTLL12Q14166 644 aaPredicted RBP4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 KIF22Q14807 665 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 PKN1Q16512 942 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 TBC1D10BQ4KMP7 808 aaPredicted RBP4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 OTUD7BQ6GQQ9 843 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 SAMD1Q6SPF0 538 aaPredicted RBP4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 FRMD5Q7Z6J6 570 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 NIM1KQ8IY84 436 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 HERVK_113Q902F9 699 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 PSMD1Q99460 953 aa4.96□□□□□ -1.62
SCARNA13-201ENST00000516672 ZZEF1O43149 2961 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 KDRP35968 1356 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 POLR2AP24928 1970 aaKnown RBP4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 NTRK1P04629 796 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 CXCL9Q07325 125 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 SRSF1Q07955 248 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 BMP8AQ7Z5Y6 402 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 MICALL2Q8IY33 904 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 CRACR2BQ8N4Y2 399 aaPredicted RBP4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 ZNF513Q8N8E2 541 aaPredicted RBP4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 HLA-CQ95604 372 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 PBXIP1Q96AQ6 731 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 SLC4A9Q96Q91 983 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 DAPK1P53355 1430 aa4.95□□□□□ -1.62
SCARNA13-201ENST00000516672 DDX60LQ5H9U9 1706 aaKnown RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 WDR87Q6ZQQ6 2873 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 NFAT5O94916 1531 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 PLEKHG3A1L390 1219 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 KDM4AO75164 1064 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 PROS1P07225 676 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 U2AF1L5P0DN76 240 aaPredicted RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 LACTBP83111 547 aaPredicted RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 U2AF1Q01081 240 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 PTPN12Q05209 780 aaKnown RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 LRRC26Q2I0M4 334 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 RNPC3Q96LT9 517 aaKnown RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 PAK6Q9NQU5 681 aaPredicted RBP4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 SRRDQ9UH36 339 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 HECTD1Q9ULT8 2610 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 RIC1Q4ADV7 1423 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 PFASO15067 1338 aa4.94□□□□□ -1.62
SCARNA13-201ENST00000516672 VPS13AQ96RL7 3174 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 A0A1B0GTL3 188 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 LCHNA4D1U4 455 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 ENO4A6NNW6 628 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 VCPP55072 806 aaKnown RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 RBM26Q5T8P6 1007 aaKnown RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 PRR5LQ6MZQ0 368 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 TENM4Q6N022 2769 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 WHAMMQ8TF30 809 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 MYO9AB2RTY4 2548 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 ASTN2O75129 1339 aaPredicted RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 MYH14Q7Z406 1995 aaKnown RBP4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 TEX15Q9BXT5 2789 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 LTBP2Q14767 1821 aa4.93□□□□□ -1.62
SCARNA13-201ENST00000516672 FBN2P35556 2912 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 VPS8Q8N3P4 1428 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 SNED1Q8TER0 1413 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 RELNP78509 3460 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 ATXN1P54253 815 aaKnown RBP4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 FBXL6Q8N531 539 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 PTPN18Q99952 460 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 RBM42Q9BTD8 480 aaKnown RBP4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 CDK19Q9BWU1 502 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 ATG3Q9NT62 314 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 MYPNQ86TC9 1320 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 ADGRA2Q96PE1 1338 aa4.92□□□□□ -1.62
SCARNA13-201ENST00000516672 NBEAQ8NFP9 2946 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 TMEM221A6NGB7 291 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 EIF4E1BA6NMX2 242 aaKnown RBP4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 M0R296 226 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 FMNL1O95466 1100 aaPredicted RBP4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 INHAP05111 366 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 OSBPP22059 807 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 CTGFP29279 349 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 PBX2P40425 430 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms