RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 CACNA1SQ13698 1873 aa16.78■□□□□ 0.28
ABCC3-216ENST00000515585 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 SGSM2O43147 1006 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 MMP10P09238 476 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
ABCC3-216ENST00000515585 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.28
ABCC3-216ENST00000515585 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
ABCC3-216ENST00000515585 TAF5LO75529 589 aa16.76■□□□□ 0.27
ABCC3-216ENST00000515585 SLC5A1P13866 664 aa16.76■□□□□ 0.27
ABCC3-216ENST00000515585 CCDC158Q5M9N0 1113 aa16.76■□□□□ 0.27
ABCC3-216ENST00000515585 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
ABCC3-216ENST00000515585 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
ABCC3-216ENST00000515585 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
ABCC3-216ENST00000515585 RAD50Q92878 1312 aa16.75■□□□□ 0.27
ABCC3-216ENST00000515585 HIP1O00291 1037 aa16.75■□□□□ 0.27
ABCC3-216ENST00000515585 IFIT1P09914 478 aaKnown RBP16.75■□□□□ 0.27
ABCC3-216ENST00000515585 SCARF1Q14162 830 aa16.75■□□□□ 0.27
ABCC3-216ENST00000515585 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
ABCC3-216ENST00000515585 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
ABCC3-216ENST00000515585 C10orf71Q711Q0 1435 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 SNAP23O00161 211 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 REC8O95072 547 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 MCAMP43121 646 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 PHKA1P46020 1223 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 KIF2CQ99661 725 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
ABCC3-216ENST00000515585 DUOX1Q9NRD9 1551 aa16.73■□□□□ 0.27
ABCC3-216ENST00000515585 MSH5O43196 834 aa16.73■□□□□ 0.27
ABCC3-216ENST00000515585 SRGNP10124 158 aa16.73■□□□□ 0.27
ABCC3-216ENST00000515585 TTC39AQ5SRH9 613 aa16.73■□□□□ 0.27
ABCC3-216ENST00000515585 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
ABCC3-216ENST00000515585 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
ABCC3-216ENST00000515585 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
ABCC3-216ENST00000515585 NPHP1O15259 732 aa16.72■□□□□ 0.27
ABCC3-216ENST00000515585 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
ABCC3-216ENST00000515585 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
ABCC3-216ENST00000515585 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
ABCC3-216ENST00000515585 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
ABCC3-216ENST00000515585 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
ABCC3-216ENST00000515585 SLX4Q8IY92 1834 aa16.72■□□□□ 0.27
ABCC3-216ENST00000515585 COL1A1P02452 1464 aaPredicted RBP16.72■□□□□ 0.27
ABCC3-216ENST00000515585 MAST2Q6P0Q8 1798 aa16.72■□□□□ 0.27
ABCC3-216ENST00000515585 WTIPA6NIX2 430 aaPredicted RBP16.71■□□□□ 0.27
ABCC3-216ENST00000515585 BBOX1O75936 387 aa16.71■□□□□ 0.27
ABCC3-216ENST00000515585 NMIQ13287 307 aaPredicted RBP16.71■□□□□ 0.27
ABCC3-216ENST00000515585 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
ABCC3-216ENST00000515585 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
ABCC3-216ENST00000515585 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
ABCC3-216ENST00000515585 FSD1Q9BTV5 496 aa16.71■□□□□ 0.27
ABCC3-216ENST00000515585 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
ABCC3-216ENST00000515585 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.27
ABCC3-216ENST00000515585 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
ABCC3-216ENST00000515585 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 GOLIM4O00461 696 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 NPR1P16066 1061 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 PDE6BP35913 854 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 ZAP70P43403 619 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 GORABQ5T7V8 394 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 FAM227BQ96M60 508 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 HMG20BQ9P0W2 317 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
ABCC3-216ENST00000515585 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
ABCC3-216ENST00000515585 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
ABCC3-216ENST00000515585 RASGRF1Q13972 1273 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
ABCC3-216ENST00000515585 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 FAM84BQ96KN1 310 aaPredicted RBP16.69■□□□□ 0.26
ABCC3-216ENST00000515585 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 XDHP47989 1333 aa16.69■□□□□ 0.26
ABCC3-216ENST00000515585 BCAMP50895 628 aa16.68■□□□□ 0.26
ABCC3-216ENST00000515585 APLP1P51693 650 aa16.68■□□□□ 0.26
ABCC3-216ENST00000515585 KCNB2Q92953 911 aa16.68■□□□□ 0.26
ABCC3-216ENST00000515585 IPO9Q96P70 1041 aaKnown RBP16.68■□□□□ 0.26
ABCC3-216ENST00000515585 SEMA3EO15041 775 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 KLRK1P26718 216 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
ABCC3-216ENST00000515585 KIF3CO14782 793 aa16.66■□□□□ 0.26
ABCC3-216ENST00000515585 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
ABCC3-216ENST00000515585 CHGBP05060 677 aa16.66■□□□□ 0.26
ABCC3-216ENST00000515585 HSPA4P34932 840 aa16.66■□□□□ 0.26
ABCC3-216ENST00000515585 ANAPC15P60006 121 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms