RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 DACT2Q5SW24 774 aa13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 SAPCD2Q86UD0 394 aa13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 CHMP3Q9Y3E7 222 aa13.24□□□□□ -0.29
HMGXB3-205ENST00000514469 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 C15orf52Q6ZUT6 534 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 CAPNS2Q96L46 248 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 GGA3Q9NZ52 723 aa13.23□□□□□ -0.29
HMGXB3-205ENST00000514469 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 FOXN1O15353 648 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 USP17L8P0C7I0 530 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 ECE1P42892 770 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 KCNJ4P48050 445 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 CYP4F22Q6NT55 531 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
HMGXB3-205ENST00000514469 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 SNAP23O00161 211 aa13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 TAF5LO75529 589 aa13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 RABL6Q3YEC7 729 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 MXD3Q9BW11 206 aa13.21□□□□□ -0.29
HMGXB3-205ENST00000514469 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 SCARF1Q14162 830 aa13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
HMGXB3-205ENST00000514469 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 MMP14P50281 582 aa13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
HMGXB3-205ENST00000514469 IL1R1P14778 569 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 GRM1Q13255 1194 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 GBA2Q9HCG7 927 aaPredicted RBP13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
HMGXB3-205ENST00000514469 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 ARAP2Q8WZ64 1704 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 AOC2O75106 756 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 MAP2K2P36507 400 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 HUNKP57058 714 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 GTF2IP78347 998 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 TNS4Q8IZW8 715 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
HMGXB3-205ENST00000514469 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 WNT10BO00744 389 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 C2orf69Q8N8R5 385 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
HMGXB3-205ENST00000514469 PLIN1O60240 522 aa13.15□□□□□ -0.3
HMGXB3-205ENST00000514469 SASH1O94885 1247 aa13.15□□□□□ -0.3
HMGXB3-205ENST00000514469 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
HMGXB3-205ENST00000514469 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
HMGXB3-205ENST00000514469 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
HMGXB3-205ENST00000514469 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 LBX1P52954 281 aa13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 FKBP1BP68106 108 aa13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 NOGQ13253 232 aa13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 RGMBQ6NW40 437 aa13.14□□□□□ -0.31
HMGXB3-205ENST00000514469 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms