RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 C4BP0C0L5 1744 aa9□□□□□ -0.97
SRPK1-213ENST00000513367 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
SRPK1-213ENST00000513367 NEDD1Q8NHV4 660 aa8.99□□□□□ -0.97
SRPK1-213ENST00000513367 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
SRPK1-213ENST00000513367 TBC1D2Q9BYX2 928 aa8.99□□□□□ -0.97
SRPK1-213ENST00000513367 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
SRPK1-213ENST00000513367 MMP10P09238 476 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 GJA5P36382 358 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 ERFEQ4G0M1 354 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 ZNF395Q9H8N7 513 aaPredicted RBP8.98□□□□□ -0.97
SRPK1-213ENST00000513367 LTN1O94822 1766 aa8.98□□□□□ -0.97
SRPK1-213ENST00000513367 VIRMAQ69YN4 1812 aaKnown RBP8.97□□□□□ -0.97
SRPK1-213ENST00000513367 KRBA1A5PL33 1030 aa8.97□□□□□ -0.97
SRPK1-213ENST00000513367 GPR25O00155 361 aa8.97□□□□□ -0.97
SRPK1-213ENST00000513367 HSPA8P11142 646 aaKnown RBP8.97□□□□□ -0.97
SRPK1-213ENST00000513367 DCAF11Q8TEB1 546 aa8.97□□□□□ -0.97
SRPK1-213ENST00000513367 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
SRPK1-213ENST00000513367 BCRP11274 1271 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 KCNA3P22001 575 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 ARMC2Q8NEN0 867 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 ACDQ96AP0 544 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 MBIPQ9NS73 344 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 CNTNAP1P78357 1384 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 CCDC88AQ3V6T2 1871 aa8.96□□□□□ -0.98
SRPK1-213ENST00000513367 GLTPD2A6NH11 291 aa8.95□□□□□ -0.98
SRPK1-213ENST00000513367 HMGB2P26583 209 aaKnown RBP8.95□□□□□ -0.98
SRPK1-213ENST00000513367 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
SRPK1-213ENST00000513367 ZCRB1Q8TBF4 217 aaKnown RBP8.95□□□□□ -0.98
SRPK1-213ENST00000513367 TSC1Q92574 1164 aa8.95□□□□□ -0.98
SRPK1-213ENST00000513367 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
SRPK1-213ENST00000513367 PALLDQ8WX93 1383 aa8.95□□□□□ -0.98
SRPK1-213ENST00000513367 SSFA2P28290 1259 aa8.94□□□□□ -0.98
SRPK1-213ENST00000513367 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
SRPK1-213ENST00000513367 DALRD3Q5D0E6 543 aaKnown RBP8.94□□□□□ -0.98
SRPK1-213ENST00000513367 GIGYF2Q6Y7W6 1299 aaKnown RBP8.94□□□□□ -0.98
SRPK1-213ENST00000513367 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
SRPK1-213ENST00000513367 CCDC87Q9NVE4 849 aa8.94□□□□□ -0.98
SRPK1-213ENST00000513367 PIM2Q9P1W9 311 aa8.94□□□□□ -0.98
SRPK1-213ENST00000513367 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
SRPK1-213ENST00000513367 MPRIPQ6WCQ1 1025 aa8.93□□□□□ -0.98
SRPK1-213ENST00000513367 TTC21AQ8NDW8 1320 aa8.93□□□□□ -0.98
SRPK1-213ENST00000513367 NSD3Q9BZ95 1437 aa8.93□□□□□ -0.98
SRPK1-213ENST00000513367 RGPD2P0DJD1 1756 aa8.93□□□□□ -0.98
SRPK1-213ENST00000513367 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
SRPK1-213ENST00000513367 LINC00116Q8NCU8 138 aa8.92□□□□□ -0.98
SRPK1-213ENST00000513367 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
SRPK1-213ENST00000513367 C4AP0C0L4 1744 aa8.91□□□□□ -0.98
SRPK1-213ENST00000513367 ZC3H4Q9UPT8 1303 aaKnown RBP8.91□□□□□ -0.98
SRPK1-213ENST00000513367 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
SRPK1-213ENST00000513367 PRPF38BQ5VTL8 546 aaKnown RBP8.91□□□□□ -0.98
SRPK1-213ENST00000513367 ITGB4P16144 1822 aa8.91□□□□□ -0.98
SRPK1-213ENST00000513367 TIAM2Q8IVF5 1701 aa8.91□□□□□ -0.98
SRPK1-213ENST00000513367 FAM208AQ9UK61 1670 aaKnown RBP8.91□□□□□ -0.98
SRPK1-213ENST00000513367 CENPJQ9HC77 1338 aaPredicted RBP8.9□□□□□ -0.98
SRPK1-213ENST00000513367 TMF1P82094 1093 aa8.9□□□□□ -0.98
SRPK1-213ENST00000513367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.9□□□□□ -0.98
SRPK1-213ENST00000513367 NLGN1Q8N2Q7 840 aa8.9□□□□□ -0.98
SRPK1-213ENST00000513367 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.98
SRPK1-213ENST00000513367 MEGF6O75095 1541 aa8.9□□□□□ -0.99
SRPK1-213ENST00000513367 MAP2P11137 1827 aaKnown RBP8.89□□□□□ -0.99
SRPK1-213ENST00000513367 RHOQP17081 205 aa8.89□□□□□ -0.99
SRPK1-213ENST00000513367 LMNB1P20700 586 aa8.89□□□□□ -0.99
SRPK1-213ENST00000513367 CHRNA5P30532 468 aa8.89□□□□□ -0.99
SRPK1-213ENST00000513367 DBN1Q16643 649 aa8.89□□□□□ -0.99
SRPK1-213ENST00000513367 RIC3Q7Z5B4 369 aa8.89□□□□□ -0.99
SRPK1-213ENST00000513367 KDF1Q8NAX2 398 aaPredicted RBP8.89□□□□□ -0.99
SRPK1-213ENST00000513367 SMARCC1Q92922 1105 aaPredicted RBP8.89□□□□□ -0.99
SRPK1-213ENST00000513367 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
SRPK1-213ENST00000513367 KTN1Q86UP2 1357 aaKnown RBP8.88□□□□□ -0.99
SRPK1-213ENST00000513367 TMEM88BA6NKF7 163 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 ITGB7P26010 798 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 COL8A1P27658 744 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 MAP2K1Q02750 393 aaPredicted RBP8.88□□□□□ -0.99
SRPK1-213ENST00000513367 QPCTQ16769 361 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 LCE3BQ5TA77 95 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 LYSMD3Q7Z3D4 306 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 NME9Q86XW9 330 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 IP6K1Q92551 441 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 MCOLN1Q9GZU1 580 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
SRPK1-213ENST00000513367 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 CASP8AP2Q9UKL3 1982 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 LOC102724428A0A0B4J2F2 783 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 SIK1P57059 783 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 DHX9Q08211 1270 aaKnown RBP8.87□□□□□ -0.99
SRPK1-213ENST00000513367 ITPK1Q13572 414 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 TRIM22Q8IYM9 498 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 KRTAP4-12Q9BQ66 201 aa8.87□□□□□ -0.99
SRPK1-213ENST00000513367 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
SRPK1-213ENST00000513367 GYS1P13807 737 aa8.86□□□□□ -0.99
SRPK1-213ENST00000513367 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
SRPK1-213ENST00000513367 AMHR2Q16671 573 aa8.86□□□□□ -0.99
SRPK1-213ENST00000513367 DEFB115Q30KQ5 88 aa8.86□□□□□ -0.99
SRPK1-213ENST00000513367 PIGBQ92521 554 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms