RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 STAP2Q9UGK3 403 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 NSFL1CQ9UNZ2 370 aaKnown RBP13.27□□□□□ -0.29
PFDN1-204ENST00000512707 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
PFDN1-204ENST00000512707 PDE1AP54750 535 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 TIMM10P62072 90 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
PFDN1-204ENST00000512707 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 DPP8Q6V1X1 898 aaPredicted RBP13.26□□□□□ -0.29
PFDN1-204ENST00000512707 VPS37DQ86XT2 251 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
PFDN1-204ENST00000512707 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
PFDN1-204ENST00000512707 UFL1O94874 794 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 FGFR2P21802 821 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 MPNDQ8N594 471 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 SUPT20HQ8NEM7 779 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 OTUD7AQ8TE49 926 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-204ENST00000512707 XAGE2Q96GT9 111 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 EYA3Q99504 573 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
PFDN1-204ENST00000512707 TAF1P21675 1872 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 LRRC37AA6NMS7 1700 aa13.25□□□□□ -0.29
PFDN1-204ENST00000512707 COL4A1P02462 1669 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.296e-9■■□□□ 12.6
PFDN1-204ENST00000512707 GPSM2P81274 684 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
PFDN1-204ENST00000512707 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
PFDN1-204ENST00000512707 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
PFDN1-204ENST00000512707 ATP5JP18859 108 aa13.23□□□□□ -0.29
PFDN1-204ENST00000512707 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
PFDN1-204ENST00000512707 TTC22Q5TAA0 569 aa13.23□□□□□ -0.29
PFDN1-204ENST00000512707 SKAP1Q86WV1 359 aa13.23□□□□□ -0.29
PFDN1-204ENST00000512707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
PFDN1-204ENST00000512707 ARAP2Q8WZ64 1704 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 G3V3G9 751 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 C21orf2O43822 256 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 FRAT2O75474 233 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-204ENST00000512707 KCNA3P22001 575 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 ADORA1P30542 326 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 C15orf52Q6ZUT6 534 aaKnown RBP13.22□□□□□ -0.29
PFDN1-204ENST00000512707 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.22□□□□□ -0.29
PFDN1-204ENST00000512707 ZNF512BQ96KM6 892 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-204ENST00000512707 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
PFDN1-204ENST00000512707 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
PFDN1-204ENST00000512707 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 SEMA3EO15041 775 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
PFDN1-204ENST00000512707 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 CCDC102BQ68D86 513 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 CASC1Q6TDU7 716 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 PI4K2BQ8TCG2 481 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
PFDN1-204ENST00000512707 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
PFDN1-204ENST00000512707 SNAP23O00161 211 aa13.2□□□□□ -0.3
PFDN1-204ENST00000512707 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-204ENST00000512707 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
PFDN1-204ENST00000512707 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
PFDN1-204ENST00000512707 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
PFDN1-204ENST00000512707 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
PFDN1-204ENST00000512707 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
PFDN1-204ENST00000512707 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
PFDN1-204ENST00000512707 PHKA1P46020 1223 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 GYG1P46976 350 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 BCAMP50895 628 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-204ENST00000512707 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 PSMD1Q99460 953 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 HAUS7Q99871 368 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 RTFDC1Q9BY42 306 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-204ENST00000512707 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 POLLQ9UGP5 575 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 DENND2AQ9ULE3 1009 aa13.19□□□□□ -0.3
PFDN1-204ENST00000512707 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-204ENST00000512707 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
PFDN1-204ENST00000512707 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
PFDN1-204ENST00000512707 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
PFDN1-204ENST00000512707 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
PFDN1-204ENST00000512707 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
PFDN1-204ENST00000512707 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
PFDN1-204ENST00000512707 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
PFDN1-204ENST00000512707 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
PFDN1-204ENST00000512707 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms