RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 IL25Q9H293 177 aa19.21■□□□□ 0.67
SQSTM1-213ENST00000510187 TNRC6CQ9HCJ0 1690 aaKnown RBP19.21■□□□□ 0.67
SQSTM1-213ENST00000510187 WDR33Q9C0J8 1336 aaKnown RBP19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 NRXN2Q9P2S2 1712 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 DDX46Q7L014 1031 aaKnown RBP19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 BRIP1Q9BX63 1249 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 SNX14Q9Y5W7 946 aa19.2■□□□□ 0.66
SQSTM1-213ENST00000510187 HS1BP3Q53T59 392 aa19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 TTC14Q96N46 770 aa19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
SQSTM1-213ENST00000510187 ZBTB7AO95365 584 aa19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 CRY2Q49AN0 593 aa19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 LRSAM1Q6UWE0 723 aa19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 AACSQ86V21 672 aa19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 CELF1Q92879 486 aaKnown RBP19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 CEP126Q9P2H0 1117 aa19.18■□□□□ 0.66
SQSTM1-213ENST00000510187 METTL24Q5JXM2 366 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 CASZ1Q86V15 1759 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 LRP5O75197 1615 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 IFIT2P09913 472 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 TNNI3KQ59H18 835 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 KCNB2Q92953 911 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
SQSTM1-213ENST00000510187 PSDA5PKW4 1024 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-213ENST00000510187 MAP4K4O95819 1239 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-213ENST00000510187 PDE6BP35913 854 aa19.16■□□□□ 0.66
SQSTM1-213ENST00000510187 TMEM87AQ8NBN3 555 aa19.16■□□□□ 0.66
SQSTM1-213ENST00000510187 TMEM63CQ9P1W3 806 aa19.16■□□□□ 0.66
SQSTM1-213ENST00000510187 MROH5Q6ZUA9 1318 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 COL4A1P02462 1669 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 HIP1O00291 1037 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 EVI5LQ96CN4 794 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 RBM17Q96I25 401 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 TM6SF1Q9BZW5 370 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 MTFR1LQ9H019 292 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 CCDC8Q9H0W5 538 aaPredicted RBP19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 RBSNQ9H1K0 784 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 BSDC1Q9NW68 430 aaPredicted RBP19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 LIMCH1Q9UPQ0 1083 aa19.15■□□□□ 0.66
SQSTM1-213ENST00000510187 GRAPQ13588 217 aa19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 PDLIM2Q96JY6 352 aa19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 GPR108Q9NPR9 543 aa19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.66
SQSTM1-213ENST00000510187 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 ZSCAN30Q86W11 494 aa19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 AKAP2Q9Y2D5 859 aa19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-213ENST00000510187 HOXA10P31260 410 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-213ENST00000510187 CWC27Q6UX04 472 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-213ENST00000510187 VGLL2Q8N8G2 317 aa19.13■□□□□ 0.65
SQSTM1-213ENST00000510187 NEUROD6Q96NK8 337 aa19.13■□□□□ 0.65
SQSTM1-213ENST00000510187 TLR7Q9NYK1 1049 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-213ENST00000510187 TAF1P21675 1872 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 ANKRD31Q8N7Z5 1873 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 A0A1B0GUL7 405 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 PDE8BO95263 885 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 SRGNP10124 158 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 TIMM10P62072 90 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 CHRNDQ07001 517 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 HELBQ8NG08 1087 aaPredicted RBP19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 SNRKQ9NRH2 765 aa19.12■□□□□ 0.65
SQSTM1-213ENST00000510187 POLD1P28340 1107 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 AK2P54819 239 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 VPS53Q5VIR6 699 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 FOXD4L5Q5VV16 416 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 FOXD4L4Q8WXT5 416 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 ZSCAN31Q96LW9 406 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 CRAMP1Q96RY5 1269 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 DBNLQ9UJU6 430 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 ZNF609O15014 1411 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 SPEF2Q9C093 1822 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 TAF5LO75529 589 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 NPR1P16066 1061 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 RUFY3Q7L099 469 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 SH2B1Q9NRF2 756 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 MINPP1Q9UNW1 487 aa19.11■□□□□ 0.65
SQSTM1-213ENST00000510187 ATP2B3Q16720 1220 aa19.1■□□□□ 0.65
SQSTM1-213ENST00000510187 C2CD5Q86YS7 1000 aa19.1■□□□□ 0.65
SQSTM1-213ENST00000510187 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
SQSTM1-213ENST00000510187 NSFL1CQ9UNZ2 370 aaKnown RBP19.1■□□□□ 0.65
SQSTM1-213ENST00000510187 SYCE3A1L190 88 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 H0YIN7 160 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 ZSCAN22P10073 491 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms