RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 DPF2Q92785 391 aa21.18■□□□□ 0.98
CLDND1-219ENST00000508659 FBXW7Q969H0 707 aa21.18■□□□□ 0.98
CLDND1-219ENST00000508659 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
CLDND1-219ENST00000508659 ZNF609O15014 1411 aa21.18■□□□□ 0.98
CLDND1-219ENST00000508659 USP17L3A6NCW0 530 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 USP17L4A6NCW7 530 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 H7C1D1 291 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 VIL1P09327 827 aaKnown RBP21.17■□□□□ 0.98
CLDND1-219ENST00000508659 USP17L1Q7RTZ2 530 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 ZNF804AQ7Z570 1209 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 SCN9AQ15858 1988 aa21.17■□□□□ 0.98
CLDND1-219ENST00000508659 LRRC24Q50LG9 513 aa21.16■□□□□ 0.98
CLDND1-219ENST00000508659 MAP1SQ66K74 1059 aaPredicted RBP21.16■□□□□ 0.98
CLDND1-219ENST00000508659 RSBN1LQ6PCB5 846 aaPredicted RBP21.16■□□□□ 0.98
CLDND1-219ENST00000508659 C15orf52Q6ZUT6 534 aaKnown RBP21.16■□□□□ 0.98
CLDND1-219ENST00000508659 ITPRIPQ8IWB1 547 aa21.16■□□□□ 0.98
CLDND1-219ENST00000508659 DZIP1LQ8IYY4 767 aaKnown RBP21.16■□□□□ 0.98
CLDND1-219ENST00000508659 RIPOR2Q9Y4F9 1068 aa21.16■□□□□ 0.98
CLDND1-219ENST00000508659 IRS2Q9Y4H2 1338 aa21.15■□□□□ 0.98
CLDND1-219ENST00000508659 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
CLDND1-219ENST00000508659 AGBL3Q8NEM8 1001 aa21.15■□□□□ 0.98
CLDND1-219ENST00000508659 PSME4Q14997 1843 aa21.14■□□□□ 0.97
CLDND1-219ENST00000508659 GNAI2P04899 355 aa21.14■□□□□ 0.97
CLDND1-219ENST00000508659 RFX5P48382 616 aaPredicted RBP21.14■□□□□ 0.97
CLDND1-219ENST00000508659 UBE4AQ14139 1066 aa21.14■□□□□ 0.97
CLDND1-219ENST00000508659 TRPM4Q8TD43 1214 aa21.14■□□□□ 0.97
CLDND1-219ENST00000508659 RCAN3Q9UKA8 241 aa21.14■□□□□ 0.97
CLDND1-219ENST00000508659 MYO3BQ8WXR4 1341 aa21.13■□□□□ 0.97
CLDND1-219ENST00000508659 EYA2O00167 538 aa21.13■□□□□ 0.97
CLDND1-219ENST00000508659 PTPN12Q05209 780 aaKnown RBP21.13■□□□□ 0.97
CLDND1-219ENST00000508659 STRIP1Q5VSL9 837 aa21.13■□□□□ 0.97
CLDND1-219ENST00000508659 SIL1Q9H173 461 aa21.13■□□□□ 0.97
CLDND1-219ENST00000508659 SRGAP3O43295 1099 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 PDE8BO95263 885 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 TBC1D10BQ4KMP7 808 aaPredicted RBP21.12■□□□□ 0.97
CLDND1-219ENST00000508659 DACT2Q5SW24 774 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 CNTROBQ8N137 903 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 VGLL2Q8N8G2 317 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 CD209Q9NNX6 404 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 FBXO3Q9UK99 471 aa21.12■□□□□ 0.97
CLDND1-219ENST00000508659 PASKQ96RG2 1323 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 CIAO1O76071 339 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 RLBP1P12271 317 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 MTX1Q13505 466 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 PUM3Q15397 648 aaKnown RBP21.11■□□□□ 0.97
CLDND1-219ENST00000508659 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 SAMD7Q7Z3H4 446 aa21.11■□□□□ 0.97
CLDND1-219ENST00000508659 USP17L8P0C7I0 530 aa21.1■□□□□ 0.97
CLDND1-219ENST00000508659 MS4A1P11836 297 aa21.1■□□□□ 0.97
CLDND1-219ENST00000508659 GTF2IP78347 998 aa21.1■□□□□ 0.97
CLDND1-219ENST00000508659 HTRA3P83110 453 aa21.1■□□□□ 0.97
CLDND1-219ENST00000508659 TTLL5Q6EMB2 1281 aa21.1■□□□□ 0.97
CLDND1-219ENST00000508659 ZC3H15Q8WU90 426 aaKnown RBP21.1■□□□□ 0.97
CLDND1-219ENST00000508659 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
CLDND1-219ENST00000508659 ITGBL1O95965 494 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-219ENST00000508659 IL1R1P14778 569 aa21.09■□□□□ 0.97
CLDND1-219ENST00000508659 HIRAP54198 1017 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-219ENST00000508659 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
CLDND1-219ENST00000508659 MXD3Q9BW11 206 aa21.09■□□□□ 0.97
CLDND1-219ENST00000508659 PA2G4Q9UQ80 394 aaKnown RBP21.09■□□□□ 0.97
CLDND1-219ENST00000508659 ZNF646O15015 1829 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-219ENST00000508659 EGFRP00533 1210 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 IFIT1P09914 478 aaKnown RBP21.08■□□□□ 0.97
CLDND1-219ENST00000508659 IL15P40933 162 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-219ENST00000508659 GYG1P46976 350 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 ZNF280AP59817 542 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-219ENST00000508659 CAVIN4Q5BKX8 364 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
CLDND1-219ENST00000508659 ATG9AQ7Z3C6 839 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 OGFOD1Q8N543 542 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 GMLQ99445 158 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 COPRSQ9NQ92 184 aa21.08■□□□□ 0.97
CLDND1-219ENST00000508659 SLC5A1P13866 664 aa21.07■□□□□ 0.96
CLDND1-219ENST00000508659 HIBADHP31937 336 aaKnown RBP21.07■□□□□ 0.96
CLDND1-219ENST00000508659 PANK1Q8TE04 598 aa21.07■□□□□ 0.96
CLDND1-219ENST00000508659 MYOZ2Q9NPC6 264 aa21.07■□□□□ 0.96
CLDND1-219ENST00000508659 CREBZFQ9NS37 354 aa21.07■□□□□ 0.96
CLDND1-219ENST00000508659 CEP350Q5VT06 3117 aa21.06■□□□□ 0.96
CLDND1-219ENST00000508659 FAM84BQ96KN1 310 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-219ENST00000508659 C1orf115Q9H7X2 142 aa21.06■□□□□ 0.96
CLDND1-219ENST00000508659 CEP126Q9P2H0 1117 aa21.06■□□□□ 0.96
CLDND1-219ENST00000508659 KIAA0825Q8IV33 1275 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 LPIN2Q92539 896 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 GGA3Q9NZ52 723 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 PGAP2Q9UHJ9 254 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 HDAC9Q9UKV0 1011 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 JAG2Q9Y219 1238 aa21.05■□□□□ 0.96
CLDND1-219ENST00000508659 TMEM88BA6NKF7 163 aa21.04■□□□□ 0.96
CLDND1-219ENST00000508659 FGFR2P21802 821 aa21.04■□□□□ 0.96
CLDND1-219ENST00000508659 ATP2B3Q16720 1220 aa21.04■□□□□ 0.96
CLDND1-219ENST00000508659 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
CLDND1-219ENST00000508659 DCPSQ96C86 337 aaKnown RBP21.04■□□□□ 0.96
CLDND1-219ENST00000508659 GLIS2Q9BZE0 524 aaPredicted RBP21.04■□□□□ 0.96
CLDND1-219ENST00000508659 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
CLDND1-219ENST00000508659 TRAF5O00463 557 aa21.03■□□□□ 0.96
CLDND1-219ENST00000508659 FRAT2O75474 233 aaPredicted RBP21.03■□□□□ 0.96
CLDND1-219ENST00000508659 SASH1O94885 1247 aa21.03■□□□□ 0.96
CLDND1-219ENST00000508659 MMP14P50281 582 aa21.03■□□□□ 0.96
CLDND1-219ENST00000508659 CDC37L1Q7L3B6 337 aa21.03■□□□□ 0.96
CLDND1-219ENST00000508659 TDRD7Q8NHU6 1098 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms